Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RNF31Q96EP0 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF31Q96EP0 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RNF31Q96EP0 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
RNF31Q96EP0 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF31Q96EP0 FUNDC2P3-201ENST00000334716 533 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 MIR188-201ENST00000385034 86 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AL050305.1-201ENST00000399993 1230 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF31Q96EP0 AL929472.1-201ENST00000417484 429 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC013268.2-201ENST00000420753 337 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 MTND4LP13-201ENST00000425022 298 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC083862.1-201ENST00000427378 1242 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF31Q96EP0 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF31Q96EP0 AMYP1-201ENST00000440059 1023 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.21□□□□□ -1.42
RNF31Q96EP0 POU5F1P5-201ENST00000445059 658 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 RPL32P14-201ENST00000463196 378 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC063943.2-201ENST00000495697 534 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC022206.1-201ENST00000495947 347 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 HSD3BP3-201ENST00000514706 994 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC6.21□□□□□ -1.42
RNF31Q96EP0 AL133399.1-201ENST00000527476 298 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC006512.2-201ENST00000543250 486 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF31Q96EP0 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC090115.2-201ENST00000548060 883 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF31Q96EP0 RN7SL230P-201ENST00000580835 303 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC067852.5-201ENST00000589299 310 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC107993.1-201ENST00000591343 684 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 MIMT1-201ENST00000597105 1050 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC004805.3-201ENST00000603178 310 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC013444.2-201ENST00000603317 787 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC073046.2-201ENST00000604756 527 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC106052.1-201ENST00000608029 497 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC093635.1-201ENST00000609028 555 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC008759.3-201ENST00000613300 508 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 U1.41-201ENST00000617626 165 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC025262.3-201ENST00000623666 360 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AP001962.1-201ENST00000624114 559 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC008691.1-209ENST00000642094 814 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 ZNF402P-201ENST00000404435 3100 ntBASIC6.21□□□□□ -1.42
RNF31Q96EP0 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF31Q96EP0 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF31Q96EP0 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RNF31Q96EP0 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF31Q96EP0 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.21□□□□□ -1.42
RNF31Q96EP0 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF31Q96EP0 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RNF31Q96EP0 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RNF31Q96EP0 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF31Q96EP0 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
RNF31Q96EP0 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF31Q96EP0 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
RNF31Q96EP0 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RNF31Q96EP0 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF31Q96EP0 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF31Q96EP0 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF31Q96EP0 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF31Q96EP0 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF31Q96EP0 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF31Q96EP0 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
RNF31Q96EP0 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.2□□□□□ -1.42
RNF31Q96EP0 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF31Q96EP0 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF31Q96EP0 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.2□□□□□ -1.42
RNF31Q96EP0 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.2□□□□□ -1.42
RNF31Q96EP0 RN7SKP281-201ENST00000410472 352 ntBASIC6.2□□□□□ -1.42
RNF31Q96EP0 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF31Q96EP0 RPL12P43-201ENST00000420608 499 ntBASIC6.2□□□□□ -1.42
RNF31Q96EP0 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF31Q96EP0 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF31Q96EP0 AL389925.1-201ENST00000432257 728 ntBASIC6.2□□□□□ -1.42
RNF31Q96EP0 MTND2P22-201ENST00000444325 1033 ntBASIC6.2□□□□□ -1.42
RNF31Q96EP0 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF31Q96EP0 AC093166.3-201ENST00000448785 303 ntBASIC6.2□□□□□ -1.42
RNF31Q96EP0 NDUFA5P5-201ENST00000468361 342 ntBASIC6.2□□□□□ -1.42
RNF31Q96EP0 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF31Q96EP0 PFN1P8-201ENST00000497012 543 ntBASIC6.2□□□□□ -1.42
RNF31Q96EP0 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF31Q96EP0 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.2□□□□□ -1.42
RNF31Q96EP0 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF31Q96EP0 AC069306.1-201ENST00000507006 843 ntBASIC6.2□□□□□ -1.42
RNF31Q96EP0 AC021106.1-201ENST00000509020 1058 ntBASIC6.2□□□□□ -1.42
RNF31Q96EP0 AC011352.2-201ENST00000514574 1016 ntBASIC6.2□□□□□ -1.42
RNF31Q96EP0 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF31Q96EP0 AP000662.1-201ENST00000530952 487 ntBASIC6.2□□□□□ -1.42
RNF31Q96EP0 GLRXP2-201ENST00000555594 321 ntBASIC6.2□□□□□ -1.42
RNF31Q96EP0 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF31Q96EP0 AC233266.2-201ENST00000567067 528 ntBASIC6.2□□□□□ -1.42
RNF31Q96EP0 AC004232.1-201ENST00000571388 208 ntBASIC6.2□□□□□ -1.42
RNF31Q96EP0 MIR4509-3-201ENST00000578671 94 ntBASIC6.2□□□□□ -1.42
RNF31Q96EP0 MIR4509-2-201ENST00000583920 94 ntBASIC6.2□□□□□ -1.42
RNF31Q96EP0 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms