Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 AC092451.2-201ENST00000538746 658 ntBASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 MIR4271-201ENST00000582451 67 ntBASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 AC073333.2-201ENST00000603589 769 ntBASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 AC018690.1-201ENST00000608144 626 ntBASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 AL357140.4-201ENST00000636827 412 ntBASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CHMP4CQ96CF2 GUCY1B2-204ENST00000531898 1979 ntBASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 AC015799.1-201ENST00000622996 3122 ntBASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 RNA5SP514-201ENST00000363717 111 ntBASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 CCNB2P1-201ENST00000399411 1150 ntBASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 OR2W4P-201ENST00000406496 926 ntBASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 AL357078.2-201ENST00000416486 427 ntBASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 AC007679.3-201ENST00000434035 414 ntBASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 ARL5AP3-201ENST00000439327 386 ntBASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 RPL31P20-201ENST00000449593 360 ntBASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 HMGB1P7-201ENST00000450921 612 ntBASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 RN7SL326P-201ENST00000477493 296 ntBASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 AP003049.1-201ENST00000529418 457 ntBASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 OR6M2P-201ENST00000529831 871 ntBASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 AC092865.1-201ENST00000544395 1023 ntBASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 AC135803.1-201ENST00000608748 565 ntBASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 MIR6811-201ENST00000620409 58 ntBASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 AL512283.1-201ENST00000606756 1384 ntBASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CHMP4CQ96CF2 AL359091.1-201ENST00000449048 1734 ntBASIC7.4□□□□□ -1.23
CHMP4CQ96CF2 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CHMP4CQ96CF2 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
CHMP4CQ96CF2 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
CHMP4CQ96CF2 AOX3P-204ENST00000491025 2107 ntBASIC7.4□□□□□ -1.23
CHMP4CQ96CF2 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CHMP4CQ96CF2 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.4□□□□□ -1.23
CHMP4CQ96CF2 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
CHMP4CQ96CF2 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 AL136984.1-201ENST00000607611 1893 ntBASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 AC120036.2-201ENST00000509729 1474 ntBASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 RN7SKP151-201ENST00000410230 316 ntBASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 RN7SKP240-201ENST00000410583 375 ntBASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 AC099782.1-201ENST00000425889 474 ntBASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 AL390879.1-201ENST00000439143 386 ntBASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 AL022319.1-201ENST00000458183 1167 ntBASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 AP002453.1-201ENST00000492327 668 ntBASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 AC025768.1-201ENST00000510057 267 ntBASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 RNU6-319P-201ENST00000516025 108 ntBASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 AC134349.2-201ENST00000535136 910 ntBASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.39□□□□□ -1.23
CHMP4CQ96CF2 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms