Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
TM9SF4Q92544 AC100814.1-201ENST00000606963 623 ntBASIC5.73□□□□□ -1.49
TM9SF4Q92544 AL021368.1-201ENST00000607490 540 ntBASIC5.73□□□□□ -1.49
TM9SF4Q92544 AC239803.2-201ENST00000610161 430 ntBASIC5.73□□□□□ -1.49
TM9SF4Q92544 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.73□□□□□ -1.49
TM9SF4Q92544 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.73□□□□□ -1.49
TM9SF4Q92544 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
TM9SF4Q92544 AC103703.1-201ENST00000634783 663 ntBASIC5.73□□□□□ -1.49
TM9SF4Q92544 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TM9SF4Q92544 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TM9SF4Q92544 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TM9SF4Q92544 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TM9SF4Q92544 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
TM9SF4Q92544 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
TM9SF4Q92544 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TM9SF4Q92544 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TM9SF4Q92544 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TM9SF4Q92544 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TM9SF4Q92544 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 EEF1B2P8-201ENST00000414101 671 ntBASIC5.72□□□□□ -1.49
TM9SF4Q92544 RPL35AP31-201ENST00000418340 337 ntBASIC5.72□□□□□ -1.49
TM9SF4Q92544 AC244033.1-201ENST00000426826 870 ntBASIC5.72□□□□□ -1.49
TM9SF4Q92544 AC097523.2-201ENST00000435551 652 ntBASIC5.72□□□□□ -1.49
TM9SF4Q92544 AC023141.3-201ENST00000436698 278 ntBASIC5.72□□□□□ -1.49
TM9SF4Q92544 TUBB4BP6-201ENST00000437576 479 ntBASIC5.72□□□□□ -1.49
TM9SF4Q92544 AL136455.1-201ENST00000441083 1240 ntBASIC5.72□□□□□ -1.49
TM9SF4Q92544 BTBD7P2-201ENST00000441962 620 ntBASIC5.72□□□□□ -1.49
TM9SF4Q92544 AC073109.1-201ENST00000445066 978 ntBASIC5.72□□□□□ -1.49
TM9SF4Q92544 AC005077.1-201ENST00000449226 375 ntBASIC5.72□□□□□ -1.49
TM9SF4Q92544 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 AL355032.1-201ENST00000472981 438 ntBASIC5.72□□□□□ -1.49
TM9SF4Q92544 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 GTF2IP11-201ENST00000526931 420 ntBASIC5.72□□□□□ -1.49
TM9SF4Q92544 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 AC090651.1-201ENST00000567865 634 ntBASIC5.72□□□□□ -1.49
TM9SF4Q92544 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TM9SF4Q92544 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TM9SF4Q92544 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 MIR6768-201ENST00000610734 72 ntBASIC5.72□□□□□ -1.49
TM9SF4Q92544 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TM9SF4Q92544 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TM9SF4Q92544 AL078595.2-201ENST00000605309 1780 ntBASIC5.72□□□□□ -1.49
TM9SF4Q92544 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TM9SF4Q92544 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 AC015799.1-201ENST00000622996 3122 ntBASIC5.72□□□□□ -1.49
TM9SF4Q92544 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 AL731532.1-201ENST00000623972 4236 ntBASIC5.72□□□□□ -1.49
TM9SF4Q92544 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TM9SF4Q92544 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TM9SF4Q92544 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.71□□□□□ -1.49
TM9SF4Q92544 AC092692.1-201ENST00000623625 2595 ntBASIC5.71□□□□□ -1.49
TM9SF4Q92544 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
TM9SF4Q92544 AL592429.1-201ENST00000403909 1473 ntBASIC5.71□□□□□ -1.49
TM9SF4Q92544 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.71□□□□□ -1.49
TM9SF4Q92544 AC008627.1-201ENST00000517511 1704 ntBASIC5.71□□□□□ -1.49
TM9SF4Q92544 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
TM9SF4Q92544 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.49
TM9SF4Q92544 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF4Q92544 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF4Q92544 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.71□□□□□ -1.5
TM9SF4Q92544 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 RN7SKP77-201ENST00000363261 353 ntBASIC5.71□□□□□ -1.5
TM9SF4Q92544 RNU1-49P-201ENST00000363468 159 ntBASIC5.71□□□□□ -1.5
TM9SF4Q92544 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF4Q92544 AL121835.1-201ENST00000404250 354 ntBASIC5.71□□□□□ -1.5
TM9SF4Q92544 AL512422.1-201ENST00000407033 553 ntBASIC5.71□□□□□ -1.5
TM9SF4Q92544 AC245096.1-201ENST00000413104 546 ntBASIC5.71□□□□□ -1.5
TM9SF4Q92544 UBE2V1P14-201ENST00000415815 558 ntBASIC5.71□□□□□ -1.5
TM9SF4Q92544 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 OR13K1P-201ENST00000444577 975 ntBASIC5.71□□□□□ -1.5
TM9SF4Q92544 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 snoU13.29-201ENST00000459370 104 ntBASIC5.71□□□□□ -1.5
TM9SF4Q92544 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TM9SF4Q92544 RN7SL101P-201ENST00000496350 279 ntBASIC5.71□□□□□ -1.5
TM9SF4Q92544 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 SETP21-201ENST00000514799 892 ntBASIC5.71□□□□□ -1.5
TM9SF4Q92544 RNA5SP340-201ENST00000517132 107 ntBASIC5.71□□□□□ -1.5
TM9SF4Q92544 AC022826.1-201ENST00000519383 805 ntBASIC5.71□□□□□ -1.5
TM9SF4Q92544 WBP1LP3-201ENST00000523033 208 ntBASIC5.71□□□□□ -1.5
TM9SF4Q92544 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.71□□□□□ -1.5
TM9SF4Q92544 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms