Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AC006213.6-201ENST00000623722 4179 ntBASIC6.21□□□□□ -1.42
HMGB4Q8WW32 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 AC015689.2-201ENST00000528172 1738 ntBASIC6.2□□□□□ -1.42
HMGB4Q8WW32 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 AL445238.1-204ENST00000400311 463 ntBASIC6.2□□□□□ -1.42
HMGB4Q8WW32 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 AC013410.2-201ENST00000422627 201 ntBASIC6.2□□□□□ -1.42
HMGB4Q8WW32 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.2□□□□□ -1.42
HMGB4Q8WW32 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 RAB28P3-201ENST00000448325 597 ntBASIC6.2□□□□□ -1.42
HMGB4Q8WW32 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 AC110749.1-201ENST00000462007 357 ntBASIC6.2□□□□□ -1.42
HMGB4Q8WW32 RN7SL717P-201ENST00000478343 297 ntBASIC6.2□□□□□ -1.42
HMGB4Q8WW32 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 AK4P6-201ENST00000505168 528 ntBASIC6.2□□□□□ -1.42
HMGB4Q8WW32 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 RPL7L1P4-201ENST00000513004 707 ntBASIC6.2□□□□□ -1.42
HMGB4Q8WW32 SETP21-201ENST00000514799 892 ntBASIC6.2□□□□□ -1.42
HMGB4Q8WW32 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 WBP1LP3-201ENST00000523033 208 ntBASIC6.2□□□□□ -1.42
HMGB4Q8WW32 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 OR4V1P-201ENST00000525394 1140 ntBASIC6.2□□□□□ -1.42
HMGB4Q8WW32 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 MIMT1-201ENST00000597105 1050 ntBASIC6.2□□□□□ -1.42
HMGB4Q8WW32 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 CYCSP1-201ENST00000604815 315 ntBASIC6.2□□□□□ -1.42
HMGB4Q8WW32 AP000240.1-201ENST00000609910 452 ntBASIC6.2□□□□□ -1.42
HMGB4Q8WW32 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 ZNF658B-201ENST00000602828 3408 ntBASIC6.2□□□□□ -1.42
HMGB4Q8WW32 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 Z93929.1-201ENST00000418200 1475 ntBASIC6.2□□□□□ -1.42
HMGB4Q8WW32 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB4Q8WW32 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 AC011416.1-201ENST00000514947 1732 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 RARSP1-201ENST00000542842 1418 ntBASIC6.19□□□□□ -1.42
HMGB4Q8WW32 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HMGB4Q8WW32 GUCY1B2-204ENST00000531898 1979 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms