Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 AC109780.1-201ENST00000451768 1344 ntBASIC6□□□□□ -1.45
SHROOM3Q8TF72 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHROOM3Q8TF72 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHROOM3Q8TF72 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHROOM3Q8TF72 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SHROOM3Q8TF72 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHROOM3Q8TF72 RNU1-19P-201ENST00000363306 165 ntBASIC6□□□□□ -1.45
SHROOM3Q8TF72 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 RNU4-64P-201ENST00000410795 131 ntBASIC6□□□□□ -1.45
SHROOM3Q8TF72 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 MIR4311-201ENST00000580794 100 ntBASIC6□□□□□ -1.45
SHROOM3Q8TF72 PRELID3BP3-201ENST00000584963 545 ntBASIC6□□□□□ -1.45
SHROOM3Q8TF72 FAM27E4-201ENST00000605259 342 ntBASIC6□□□□□ -1.45
SHROOM3Q8TF72 RNA5SP440-201ENST00000612665 119 ntBASIC6□□□□□ -1.45
SHROOM3Q8TF72 AC037198.3-201ENST00000616754 526 ntBASIC6□□□□□ -1.45
SHROOM3Q8TF72 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SHROOM3Q8TF72 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6□□□□□ -1.45
SHROOM3Q8TF72 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHROOM3Q8TF72 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 AL353662.1-201ENST00000439099 327 ntBASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 AC064862.4-201ENST00000442180 334 ntBASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 ACA64.1-201ENST00000459171 127 ntBASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 RPL38P3-201ENST00000484463 213 ntBASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 NDUFA5P12-201ENST00000503796 343 ntBASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 AC105420.1-201ENST00000504389 582 ntBASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 TMEM97P2-201ENST00000517841 403 ntBASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 AC087269.2-201ENST00000641764 975 ntBASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 AL731532.1-201ENST00000623972 4236 ntBASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 MELK-211ENST00000545008 2236 ntTSL 2 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 AC092070.2-203ENST00000598377 3644 ntBASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SHROOM3Q8TF72 RN7SKP29-201ENST00000410957 272 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 AC073410.1-201ENST00000435125 589 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 AC023141.8-201ENST00000442554 208 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 FTLP8-201ENST00000446770 267 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 AC073610.1-201ENST00000489971 396 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 EIF3LP3-201ENST00000495197 822 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 AP000648.1-201ENST00000529682 397 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 MIR1269B-201ENST00000580405 75 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 AL031601.1-201ENST00000605702 394 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 Z83820.1-201ENST00000456978 1499 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 MARK2P4-201ENST00000503381 2380 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 RN7SKP128-201ENST00000364270 303 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 MIR130A-201ENST00000385274 89 ntBASIC5.98□□□□□ -1.45
SHROOM3Q8TF72 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms