Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 RN7SL83P-201ENST00000468131 297 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 RN7SL160P-201ENST00000468558 284 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 RN7SL390P-201ENST00000470634 284 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 RPS3AP49-201ENST00000472161 790 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 HMGB1P36-201ENST00000487709 576 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 FGB-207ENST00000509493 1164 ntTSL 5 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 CDC42P4-201ENST00000510507 563 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 OR4A43P-201ENST00000532938 908 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 SETP17-201ENST00000534163 817 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 RN7SL366P-201ENST00000577957 292 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 MIR3915-201ENST00000578518 97 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 AC005242.1-201ENST00000585658 438 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 AC004067.1-201ENST00000608733 700 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 AC009878.1-201ENST00000621819 340 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 AC095031.1-201ENST00000623685 672 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 CR381670.1-201ENST00000624291 1693 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 AC127024.8-201ENST00000623719 2094 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 AC006042.3-201ENST00000454684 1469 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 MKI67P1-201ENST00000604297 1460 ntBASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHKBP1Q8TBC3 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC241584.2-201ENST00000637142 2090 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AL158152.1-201ENST00000602652 1435 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC005839.1-201ENST00000624148 3213 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 FAM133CP-201ENST00000332869 704 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 Y_RNA.41-201ENST00000362646 102 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 Y_RNA.408-201ENST00000383987 102 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 RNU6-481P-201ENST00000384194 107 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 Y_RNA.472-201ENST00000384322 102 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC026310.1-201ENST00000396004 378 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 ATP5F1P3-201ENST00000397213 657 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 CENPIP1-201ENST00000425713 902 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 MTND1P14-201ENST00000427400 950 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AL031681.1-201ENST00000443304 400 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 SDHCP3-201ENST00000445371 506 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC004890.1-201ENST00000461005 181 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 RPS7P10-201ENST00000464254 603 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 RPL34P34-201ENST00000465389 354 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC004815.1-201ENST00000484185 331 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AP005202.1-201ENST00000489915 867 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC138853.1-201ENST00000503549 823 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 PCNAP1-201ENST00000505363 709 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 CR383658.1-201ENST00000514609 734 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC116347.2-201ENST00000514912 523 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC118273.2-201ENST00000532092 465 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 OR4A1P-201ENST00000532342 920 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 SAA3P-201ENST00000533267 365 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 PDCL2P2-201ENST00000533651 189 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC016957.1-201ENST00000534895 309 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC002400.1-201ENST00000569310 726 ntBASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC7.29□□□□□ -1.24
SHKBP1Q8TBC3 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms