Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AL157884.1-201ENST00000424561 454 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 USP9YP36-201ENST00000424581 829 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 OR5P4P-201ENST00000424698 917 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 RPL5P6-201ENST00000425640 886 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 YWHAEP5-201ENST00000431545 765 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 RBMY2NP-201ENST00000434454 1028 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 OR52B5P-201ENST00000435337 951 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 BX679664.2-201ENST00000439282 283 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 SDCBPP1-201ENST00000440192 890 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AK6-204ENST00000512561 587 ntTSL 5 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 snoU109.5-201ENST00000516231 132 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AC087280.1-201ENST00000530632 1003 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AC011611.1-201ENST00000552179 197 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AC015722.1-201ENST00000557499 385 ntTSL 3 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 ANP32BP1-202ENST00000568553 737 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 OR7A18P-201ENST00000600416 277 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AC007687.1-201ENST00000602704 304 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AC010680.4-201ENST00000605334 543 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AC124303.1-201ENST00000605703 360 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 RNVU1-19-201ENST00000613023 167 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AC018558.4-201ENST00000622153 281 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AC110769.3-201ENST00000624567 1173 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 EML5-201ENST00000380664 5910 ntTSL 5 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 LYARP1-201ENST00000436977 1501 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AL353795.1-201ENST00000439134 1775 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AC138915.3-201ENST00000562908 1389 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 YAP1-203ENST00000524575 1638 ntTSL 2 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AL121835.2-201ENST00000624253 3502 ntBASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SCUBE3Q8IX30 AC016930.1-201ENST00000468766 2205 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 TDGF1P3-202ENST00000602699 2710 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 DCAF13P3-201ENST00000561147 1334 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 MTND5P3-201ENST00000438536 1800 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 IL18R1-201ENST00000233957 3661 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 HSP90AB2P-201ENST00000507090 2176 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC036108.4-201ENST00000611654 2516 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 OSBPL6-202ENST00000315022 2999 ntTSL 2 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 Y_RNA.145-201ENST00000363527 102 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 Z97832.1-201ENST00000402490 328 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 RNU6-575P-201ENST00000411326 105 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC010385.1-201ENST00000412374 256 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 RPSAP59-201ENST00000421048 890 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 RPL23AP34-201ENST00000423483 410 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 RBMY2JP-201ENST00000425544 1059 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AC002069.1-201ENST00000429649 1159 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC8.31□□□□□ -1.08
SCUBE3Q8IX30 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms