Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 MT-RNR1-201ENST00000389680 954 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 AC104297.1-201ENST00000393779 870 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 MTATP6P19-201ENST00000413797 659 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 AL035422.1-201ENST00000414193 397 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 AC007562.1-201ENST00000421819 517 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 OR3D1P-201ENST00000438288 955 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 AC023274.2-201ENST00000445264 521 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 RN7SL168P-201ENST00000463821 279 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 RPL34P33-201ENST00000486062 334 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 UGT2A3P7-201ENST00000510485 734 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 HMGN1P17-201ENST00000513734 295 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 RNU6-319P-201ENST00000516025 108 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 AC008429.4-201ENST00000521201 182 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 AC024405.1-201ENST00000532521 1042 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 AL049874.4-201ENST00000557593 255 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 AC004232.2-201ENST00000574245 821 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 OR1E3-201ENST00000575608 948 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 MIR7109-201ENST00000613748 65 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 AL683826.1-201ENST00000624104 627 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 AL357140.4-201ENST00000636827 412 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 AOX3P-204ENST00000491025 2107 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 AC133552.1-201ENST00000569988 4007 ntBASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
NUP54Q7Z3B4 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
NUP54Q7Z3B4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.71□□□□□ -1.49
NUP54Q7Z3B4 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.71□□□□□ -1.49
NUP54Q7Z3B4 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.71□□□□□ -1.49
NUP54Q7Z3B4 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NUP54Q7Z3B4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 NPM1P10-201ENST00000398310 865 ntBASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 RPL23AP18-201ENST00000416139 468 ntBASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 DSTNP5-201ENST00000427921 523 ntBASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 GAPDHP23-201ENST00000444823 993 ntBASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 RPS27AP3-201ENST00000453803 454 ntBASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 AL022319.1-201ENST00000458183 1167 ntBASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 SEPT7P6-201ENST00000469999 1143 ntBASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 RNU6-362P-201ENST00000516736 90 ntBASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 Y_RNA.710-201ENST00000516975 110 ntBASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 AC078878.1-201ENST00000539832 958 ntBASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 AP005136.2-201ENST00000583253 1049 ntBASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 AL133406.3-201ENST00000606817 541 ntBASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 AL591167.1-201ENST00000607321 456 ntBASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 AL135786.2-201ENST00000608422 615 ntBASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 AL080312.2-201ENST00000613001 630 ntBASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 OR8A1-204ENST00000642111 1145 ntBASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
NUP54Q7Z3B4 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms