Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 AC008691.1-209ENST00000642094 814 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 AC027279.1-201ENST00000568885 4284 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 OR13C1P-202ENST00000641378 2919 ntBASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
H3F3CQ6NXT2 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 NLRP3P1-201ENST00000622303 1785 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 AC092724.1-201ENST00000624623 3397 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 AC232271.1-201ENST00000602455 2715 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 SELENOWP1-201ENST00000322792 252 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 RN7SKP78-201ENST00000364711 318 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 RNU1-59P-201ENST00000364829 162 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 RN7SKP292-201ENST00000365522 317 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 RPS3AP2-201ENST00000407190 754 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 RN7SKP166-201ENST00000410812 305 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 NMD3P2-201ENST00000421815 761 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 AL590399.4-201ENST00000436561 601 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 AC112187.1-201ENST00000455837 479 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 NXT1P1-201ENST00000458481 316 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 RN7SL352P-201ENST00000466002 277 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 OR4A40P-201ENST00000533878 948 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 AC012146.2-201ENST00000576545 416 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 RN7SL753P-201ENST00000581238 290 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 MIR6862-1-201ENST00000613016 70 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 U1.25-201ENST00000614085 162 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 MIR6862-2-201ENST00000614755 70 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 U1.34-201ENST00000618578 162 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 U1.31-201ENST00000620022 160 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 AL357153.4-201ENST00000620487 1016 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 AC127024.6-201ENST00000621598 424 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 AC103703.1-201ENST00000634783 663 ntBASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
H3F3CQ6NXT2 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 AC005725.1-201ENST00000577346 2607 ntBASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 SNORA17A-201ENST00000391185 133 ntBASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 RN7SKP151-201ENST00000410230 316 ntBASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 RN7SKP206-201ENST00000410823 293 ntBASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.52□□□□□ -1.53
H3F3CQ6NXT2 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms