Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 FO082842.1-201ENST00000423552 1370 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 MTND4P12-201ENST00000498999 1377 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 RNU6-1017P-201ENST00000363613 106 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 RNU2-65P-201ENST00000410162 185 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AC013429.2-201ENST00000418798 781 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 TRIM60P10Y-201ENST00000425589 751 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 USP9YP18-201ENST00000425912 695 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 BX119321.1-201ENST00000428912 797 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 HMGB1P31-201ENST00000437242 427 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 MTND5P14-201ENST00000441481 1267 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 COX6CP2-201ENST00000444980 225 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 CCNJP2-201ENST00000457810 1163 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AC008410.1-201ENST00000483777 339 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 RPL12P7-201ENST00000493832 494 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 OR7E157P-201ENST00000494376 911 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 MIR3154-201ENST00000577829 84 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AC005730.3-201ENST00000583067 366 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AL159169.3-201ENST00000608871 561 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AP005329.3-201ENST00000609924 686 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 5S_rRNA.23-201ENST00000612086 102 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AC006338.1-201ENST00000618453 749 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AP005212.3-201ENST00000619964 528 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AC008443.7-201ENST00000622195 246 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AP005264.7-201ENST00000625003 745 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AC111152.1-202ENST00000635848 339 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AL357140.4-201ENST00000636827 412 ntBASIC8.9□□□□□ -0.98
RC3H1Q5TC82 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC8.9□□□□□ -0.98
RC3H1Q5TC82 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC8.9□□□□□ -0.99
RC3H1Q5TC82 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
RC3H1Q5TC82 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
RC3H1Q5TC82 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
RC3H1Q5TC82 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
RC3H1Q5TC82 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC8.9□□□□□ -0.99
RC3H1Q5TC82 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.9□□□□□ -0.99
RC3H1Q5TC82 AC127459.1-201ENST00000563129 2768 ntBASIC8.9□□□□□ -0.99
RC3H1Q5TC82 TDGF1P3-202ENST00000602699 2710 ntBASIC8.89□□□□□ -0.99
RC3H1Q5TC82 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 STAG3L4-201ENST00000352103 530 ntBASIC8.89□□□□□ -0.99
RC3H1Q5TC82 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 RNU6-920P-201ENST00000410926 92 ntBASIC8.89□□□□□ -0.99
RC3H1Q5TC82 AC138393.2-201ENST00000414742 246 ntBASIC8.89□□□□□ -0.99
RC3H1Q5TC82 BTF3L4P3-201ENST00000418879 476 ntBASIC8.89□□□□□ -0.99
RC3H1Q5TC82 AC023128.2-201ENST00000420880 1223 ntBASIC8.89□□□□□ -0.99
RC3H1Q5TC82 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 MTCYBP34-201ENST00000439552 670 ntBASIC8.89□□□□□ -0.99
RC3H1Q5TC82 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 AL606662.1-201ENST00000445763 553 ntBASIC8.89□□□□□ -0.99
RC3H1Q5TC82 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 AC093166.3-201ENST00000448785 303 ntBASIC8.89□□□□□ -0.99
RC3H1Q5TC82 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 RPL34P34-201ENST00000465389 354 ntBASIC8.89□□□□□ -0.99
RC3H1Q5TC82 RN7SL654P-201ENST00000479178 292 ntBASIC8.89□□□□□ -0.99
RC3H1Q5TC82 AC023424.2-201ENST00000493479 777 ntBASIC8.89□□□□□ -0.99
RC3H1Q5TC82 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 AC092709.1-201ENST00000521355 1045 ntBASIC8.89□□□□□ -0.99
RC3H1Q5TC82 AC010198.2-201ENST00000550612 259 ntBASIC8.89□□□□□ -0.99
RC3H1Q5TC82 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC8.89□□□□□ -0.99
RC3H1Q5TC82 AC012368.3-201ENST00000604190 219 ntBASIC8.89□□□□□ -0.99
RC3H1Q5TC82 AL354760.1-201ENST00000608357 643 ntBASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms