Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC087752.1-201ENST00000391360 558 ntBASIC5.24□□□□□ -1.57
CCDC58Q4VC31 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 RNGTTP1-201ENST00000420965 728 ntBASIC5.24□□□□□ -1.57
CCDC58Q4VC31 NMD3P2-201ENST00000421815 761 ntBASIC5.24□□□□□ -1.57
CCDC58Q4VC31 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 OR6R1P-201ENST00000431838 940 ntBASIC5.24□□□□□ -1.57
CCDC58Q4VC31 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 CXCR2P1-202ENST00000443392 1074 ntBASIC5.24□□□□□ -1.57
CCDC58Q4VC31 COX4I1P2-201ENST00000447446 547 ntBASIC5.24□□□□□ -1.57
CCDC58Q4VC31 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 RPL12P39-201ENST00000455456 496 ntBASIC5.24□□□□□ -1.57
CCDC58Q4VC31 AC104164.1-201ENST00000460282 590 ntBASIC5.24□□□□□ -1.57
CCDC58Q4VC31 RN7SL197P-201ENST00000466981 299 ntBASIC5.24□□□□□ -1.57
CCDC58Q4VC31 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 RNA5SP206-201ENST00000516703 121 ntBASIC5.24□□□□□ -1.57
CCDC58Q4VC31 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 OR7E158P-201ENST00000524483 910 ntBASIC5.24□□□□□ -1.57
CCDC58Q4VC31 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 NDUFB9P1-201ENST00000604683 510 ntBASIC5.24□□□□□ -1.57
CCDC58Q4VC31 AC023206.1-201ENST00000605824 298 ntBASIC5.24□□□□□ -1.57
CCDC58Q4VC31 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 TMEM30CP-203ENST00000637814 1035 ntBASIC5.24□□□□□ -1.57
CCDC58Q4VC31 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 AC083843.2-201ENST00000568248 6253 ntBASIC5.24□□□□□ -1.57
CCDC58Q4VC31 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC58Q4VC31 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AC012254.3-201ENST00000591183 2117 ntBASIC5.23□□□□□ -1.57
CCDC58Q4VC31 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 RNU1-146P-201ENST00000364015 165 ntBASIC5.23□□□□□ -1.57
CCDC58Q4VC31 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AC003045.1-201ENST00000398779 713 ntBASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AL033519.1-201ENST00000407266 307 ntBASIC5.23□□□□□ -1.57
CCDC58Q4VC31 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AC099677.3-201ENST00000427081 395 ntBASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AC023271.1-201ENST00000445936 1090 ntBASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AC097359.1-201ENST00000447946 463 ntBASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AC114324.2-202ENST00000503812 134 ntBASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AC021269.1-201ENST00000526860 705 ntBASIC5.23□□□□□ -1.57
CCDC58Q4VC31 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AC025283.1-201ENST00000572039 734 ntBASIC5.23□□□□□ -1.57
CCDC58Q4VC31 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 OR7E19P-202ENST00000589942 844 ntBASIC5.23□□□□□ -1.57
CCDC58Q4VC31 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 AL008582.1-201ENST00000609612 442 ntBASIC5.23□□□□□ -1.57
CCDC58Q4VC31 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 uc_338.26-201ENST00000612659 160 ntBASIC5.23□□□□□ -1.57
CCDC58Q4VC31 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC58Q4VC31 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms