Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 HMGB1P20-201ENST00000402555 677 ntBASIC4.89□□□□□ -1.63
LMO4P61968 AC127526.2-201ENST00000426436 775 ntBASIC4.89□□□□□ -1.63
LMO4P61968 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC4.89□□□□□ -1.63
LMO4P61968 TRGV7-201ENST00000427089 353 ntBASIC4.89□□□□□ -1.63
LMO4P61968 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LMO4P61968 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.89□□□□□ -1.63
LMO4P61968 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.89□□□□□ -1.63
LMO4P61968 RPL7L1P3-201ENST00000455249 689 ntBASIC4.89□□□□□ -1.63
LMO4P61968 ACA64.4-201ENST00000459070 127 ntBASIC4.89□□□□□ -1.63
LMO4P61968 RPS17P15-201ENST00000475609 349 ntBASIC4.89□□□□□ -1.63
LMO4P61968 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.89□□□□□ -1.63
LMO4P61968 AL136038.1-201ENST00000497246 351 ntBASIC4.89□□□□□ -1.63
LMO4P61968 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.89□□□□□ -1.63
LMO4P61968 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.89□□□□□ -1.63
LMO4P61968 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.89□□□□□ -1.63
LMO4P61968 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.89□□□□□ -1.63
LMO4P61968 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.89□□□□□ -1.63
LMO4P61968 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LMO4P61968 OR4A42P-201ENST00000531397 938 ntBASIC4.89□□□□□ -1.63
LMO4P61968 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.89□□□□□ -1.63
LMO4P61968 AC022404.1-201ENST00000555320 273 ntBASIC4.89□□□□□ -1.63
LMO4P61968 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC4.89□□□□□ -1.63
LMO4P61968 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.89□□□□□ -1.63
LMO4P61968 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.89□□□□□ -1.63
LMO4P61968 CYCSP1-201ENST00000604815 315 ntBASIC4.89□□□□□ -1.63
LMO4P61968 RN7SL544P-201ENST00000617232 284 ntBASIC4.89□□□□□ -1.63
LMO4P61968 RN7SL763P-201ENST00000620922 284 ntBASIC4.89□□□□□ -1.63
LMO4P61968 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.89□□□□□ -1.63
LMO4P61968 AL118508.4-201ENST00000624142 1176 ntBASIC4.89□□□□□ -1.63
LMO4P61968 AC020978.9-201ENST00000624380 1141 ntBASIC4.89□□□□□ -1.63
LMO4P61968 AL138960.2-201ENST00000625145 535 ntBASIC4.89□□□□□ -1.63
LMO4P61968 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.89□□□□□ -1.63
LMO4P61968 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC4.89□□□□□ -1.63
LMO4P61968 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.89□□□□□ -1.63
LMO4P61968 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LMO4P61968 AL353763.1-201ENST00000624467 1628 ntBASIC4.89□□□□□ -1.63
LMO4P61968 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LMO4P61968 AL662795.2-201ENST00000624252 3706 ntBASIC4.89□□□□□ -1.63
LMO4P61968 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC4.89□□□□□ -1.63
LMO4P61968 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC4.89□□□□□ -1.63
LMO4P61968 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LMO4P61968 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.89□□□□□ -1.63
LMO4P61968 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LMO4P61968 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LMO4P61968 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LMO4P61968 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
LMO4P61968 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
LMO4P61968 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LMO4P61968 AC104162.1-201ENST00000430831 2382 ntBASIC4.89□□□□□ -1.63
LMO4P61968 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LMO4P61968 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LMO4P61968 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC4.88□□□□□ -1.63
LMO4P61968 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
LMO4P61968 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LMO4P61968 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.88□□□□□ -1.63
LMO4P61968 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LMO4P61968 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC4.88□□□□□ -1.63
LMO4P61968 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LMO4P61968 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
LMO4P61968 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LMO4P61968 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LMO4P61968 AC008957.3-201ENST00000624112 2242 ntBASIC4.88□□□□□ -1.63
LMO4P61968 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LMO4P61968 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LMO4P61968 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LMO4P61968 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC4.88□□□□□ -1.63
LMO4P61968 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC4.88□□□□□ -1.63
LMO4P61968 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.88□□□□□ -1.63
LMO4P61968 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LMO4P61968 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
LMO4P61968 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LMO4P61968 U3.25-201ENST00000391209 220 ntBASIC4.88□□□□□ -1.63
LMO4P61968 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC4.88□□□□□ -1.63
LMO4P61968 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.88□□□□□ -1.63
LMO4P61968 AL513325.1-201ENST00000417716 1034 ntBASIC4.88□□□□□ -1.63
LMO4P61968 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC4.88□□□□□ -1.63
LMO4P61968 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.88□□□□□ -1.63
LMO4P61968 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.88□□□□□ -1.63
LMO4P61968 AK3P5-201ENST00000432033 519 ntBASIC4.88□□□□□ -1.63
LMO4P61968 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.88□□□□□ -1.63
LMO4P61968 AC002504.1-201ENST00000438281 691 ntBASIC4.88□□□□□ -1.63
LMO4P61968 RPS12P17-201ENST00000438591 377 ntBASIC4.88□□□□□ -1.63
LMO4P61968 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.88□□□□□ -1.63
LMO4P61968 LRRC37A14P-201ENST00000452297 462 ntBASIC4.88□□□□□ -1.63
LMO4P61968 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.88□□□□□ -1.63
LMO4P61968 AC093166.4-201ENST00000457867 318 ntBASIC4.88□□□□□ -1.63
LMO4P61968 RN7SL214P-201ENST00000487317 265 ntBASIC4.88□□□□□ -1.63
LMO4P61968 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.88□□□□□ -1.63
LMO4P61968 RPL7L1P4-201ENST00000513004 707 ntBASIC4.88□□□□□ -1.63
LMO4P61968 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LMO4P61968 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.88□□□□□ -1.63
LMO4P61968 IGLV3-30-201ENST00000524362 298 ntBASIC4.88□□□□□ -1.63
LMO4P61968 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.88□□□□□ -1.63
LMO4P61968 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.88□□□□□ -1.63
LMO4P61968 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.88□□□□□ -1.63
LMO4P61968 TXNP4-201ENST00000575018 310 ntBASIC4.88□□□□□ -1.63
LMO4P61968 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.88□□□□□ -1.63
LMO4P61968 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.88□□□□□ -1.63
LMO4P61968 AC012467.1-201ENST00000607740 256 ntBASIC4.88□□□□□ -1.63
LMO4P61968 AC080188.3-201ENST00000624842 748 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms