Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.09□□□□□ -1.59
ACTBP60709 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
ACTBP60709 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ACTBP60709 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ACTBP60709 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ACTBP60709 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ACTBP60709 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ACTBP60709 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.09□□□□□ -1.59
ACTBP60709 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.09□□□□□ -1.59
ACTBP60709 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
ACTBP60709 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ACTBP60709 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ACTBP60709 SNORA64.3-201ENST00000365647 134 ntBASIC5.09□□□□□ -1.59
ACTBP60709 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
ACTBP60709 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ACTBP60709 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.09□□□□□ -1.59
ACTBP60709 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ACTBP60709 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.09□□□□□ -1.59
ACTBP60709 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.09□□□□□ -1.59
ACTBP60709 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.09□□□□□ -1.59
ACTBP60709 SOCS5P1-201ENST00000440415 949 ntBASIC5.09□□□□□ -1.59
ACTBP60709 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.09□□□□□ -1.59
ACTBP60709 AC234771.2-201ENST00000445718 597 ntBASIC5.09□□□□□ -1.59
ACTBP60709 COX4I1P2-201ENST00000447446 547 ntBASIC5.09□□□□□ -1.59
ACTBP60709 CEACAMP11-201ENST00000455211 583 ntBASIC5.09□□□□□ -1.59
ACTBP60709 DEFB109A-201ENST00000482450 265 ntBASIC5.09□□□□□ -1.59
ACTBP60709 OR11I1P-201ENST00000486033 954 ntBASIC5.09□□□□□ -1.59
ACTBP60709 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ACTBP60709 SNRPCP11-201ENST00000492453 205 ntBASIC5.09□□□□□ -1.59
ACTBP60709 KHDC1P1-201ENST00000511053 508 ntBASIC5.09□□□□□ -1.59
ACTBP60709 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ACTBP60709 AC138517.1-201ENST00000515724 568 ntBASIC5.09□□□□□ -1.59
ACTBP60709 Y_RNA.710-201ENST00000516975 110 ntBASIC5.09□□□□□ -1.59
ACTBP60709 FTH1P11-201ENST00000517577 551 ntBASIC5.09□□□□□ -1.59
ACTBP60709 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.09□□□□□ -1.59
ACTBP60709 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.09□□□□□ -1.59
ACTBP60709 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.09□□□□□ -1.59
ACTBP60709 CYCSP25-201ENST00000525280 316 ntBASIC5.09□□□□□ -1.59
ACTBP60709 AP000859.1-201ENST00000525536 307 ntBASIC5.09□□□□□ -1.59
ACTBP60709 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.09□□□□□ -1.59
ACTBP60709 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.09□□□□□ -1.59
ACTBP60709 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.09□□□□□ -1.59
ACTBP60709 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.09□□□□□ -1.59
ACTBP60709 MIR3157-201ENST00000578688 85 ntBASIC5.09□□□□□ -1.59
ACTBP60709 RN7SL475P-201ENST00000583379 298 ntBASIC5.09□□□□□ -1.59
ACTBP60709 WBP1LP11-201ENST00000586141 328 ntBASIC5.09□□□□□ -1.59
ACTBP60709 AC026898.1-201ENST00000586404 571 ntBASIC5.09□□□□□ -1.59
ACTBP60709 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.09□□□□□ -1.59
ACTBP60709 AC010503.3-201ENST00000594355 540 ntBASIC5.09□□□□□ -1.59
ACTBP60709 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ACTBP60709 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ACTBP60709 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ACTBP60709 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ACTBP60709 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ACTBP60709 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
ACTBP60709 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
ACTBP60709 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
ACTBP60709 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.08□□□□□ -1.6
ACTBP60709 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ACTBP60709 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
ACTBP60709 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ACTBP60709 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
ACTBP60709 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ACTBP60709 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.08□□□□□ -1.6
ACTBP60709 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.08□□□□□ -1.6
ACTBP60709 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.08□□□□□ -1.6
ACTBP60709 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ACTBP60709 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ACTBP60709 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ACTBP60709 RN7SKP184-201ENST00000362348 333 ntBASIC5.08□□□□□ -1.6
ACTBP60709 RNA5SP375-201ENST00000362975 119 ntBASIC5.08□□□□□ -1.6
ACTBP60709 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ACTBP60709 YWHAZP4-201ENST00000392459 708 ntBASIC5.08□□□□□ -1.6
ACTBP60709 AC003045.1-201ENST00000398779 713 ntBASIC5.08□□□□□ -1.6
ACTBP60709 RPL21P50-201ENST00000417698 477 ntBASIC5.08□□□□□ -1.6
ACTBP60709 RPS7P8-201ENST00000418311 581 ntBASIC5.08□□□□□ -1.6
ACTBP60709 AC002127.1-201ENST00000421305 225 ntBASIC5.08□□□□□ -1.6
ACTBP60709 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.08□□□□□ -1.6
ACTBP60709 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ACTBP60709 RPS7P14-201ENST00000426405 583 ntBASIC5.08□□□□□ -1.6
ACTBP60709 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.08□□□□□ -1.6
ACTBP60709 AL136231.1-201ENST00000429407 730 ntBASIC5.08□□□□□ -1.6
ACTBP60709 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.08□□□□□ -1.6
ACTBP60709 AC242426.1-201ENST00000435270 960 ntBASIC5.08□□□□□ -1.6
ACTBP60709 AC064862.5-201ENST00000440618 334 ntBASIC5.08□□□□□ -1.6
ACTBP60709 GTF2IP14-201ENST00000441415 586 ntBASIC5.08□□□□□ -1.6
ACTBP60709 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.08□□□□□ -1.6
ACTBP60709 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.08□□□□□ -1.6
ACTBP60709 AL603882.1-201ENST00000463059 681 ntBASIC5.08□□□□□ -1.6
ACTBP60709 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ACTBP60709 GM2AP2-201ENST00000491764 562 ntBASIC5.08□□□□□ -1.6
ACTBP60709 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.08□□□□□ -1.6
ACTBP60709 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.08□□□□□ -1.6
ACTBP60709 OR4D12P-201ENST00000509361 911 ntBASIC5.08□□□□□ -1.6
ACTBP60709 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.08□□□□□ -1.6
ACTBP60709 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
ACTBP60709 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.08□□□□□ -1.6
ACTBP60709 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.08□□□□□ -1.6
ACTBP60709 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.08□□□□□ -1.6
ACTBP60709 AC008055.1-201ENST00000547032 609 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms