Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.92□□□□□ -1.46
SUMO3P55854 AL132640.3-201ENST00000630473 177 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC5.92□□□□□ -1.46
SUMO3P55854 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SUMO3P55854 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.92□□□□□ -1.46
SUMO3P55854 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.92□□□□□ -1.46
SUMO3P55854 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
SUMO3P55854 AP000866.6-201ENST00000638898 3579 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.92□□□□□ -1.46
SUMO3P55854 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.92□□□□□ -1.46
SUMO3P55854 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SUMO3P55854 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.91□□□□□ -1.46
SUMO3P55854 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.91□□□□□ -1.46
SUMO3P55854 AC005702.3-201ENST00000585345 1447 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.91□□□□□ -1.46
SUMO3P55854 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.91□□□□□ -1.46
SUMO3P55854 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SUMO3P55854 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SUMO3P55854 STAG3L4-201ENST00000352103 530 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 HMGB1P13-201ENST00000406019 642 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 AL033519.1-201ENST00000407266 307 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.91□□□□□ -1.46
SUMO3P55854 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.91□□□□□ -1.46
SUMO3P55854 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.91□□□□□ -1.46
SUMO3P55854 AC023128.2-201ENST00000420880 1223 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 OR5W1P-201ENST00000423705 938 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 GPN3P1-201ENST00000423883 535 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 HMGB3P5-201ENST00000428894 612 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 GAPDHP34-201ENST00000432112 823 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 AL031313.1-201ENST00000448435 256 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 AL009048.1-201ENST00000450437 298 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 PSMC1P13-201ENST00000458195 985 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 RPS3AP6-201ENST00000484430 795 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.91□□□□□ -1.46
SUMO3P55854 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SUMO3P55854 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.91□□□□□ -1.46
SUMO3P55854 SNORA19.3-201ENST00000516165 130 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 AP001207.2-201ENST00000519490 539 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 HIGD1AP18-201ENST00000520730 278 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.91□□□□□ -1.46
SUMO3P55854 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.91□□□□□ -1.46
SUMO3P55854 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.91□□□□□ -1.46
SUMO3P55854 AC084824.2-201ENST00000548906 345 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.91□□□□□ -1.46
SUMO3P55854 HMGN1P26-201ENST00000558737 303 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 AC023968.1-201ENST00000560719 475 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 AL109741.3-201ENST00000561748 592 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.91□□□□□ -1.46
SUMO3P55854 AC012254.4-201ENST00000588843 273 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.91□□□□□ -1.46
SUMO3P55854 AP001160.4-201ENST00000596971 382 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 AL445435.1-201ENST00000604232 665 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 AL390877.1-201ENST00000605704 214 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
SUMO3P55854 AC022079.2-201ENST00000619739 566 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 MRPL57P1-201ENST00000621486 265 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 AC024023.1-201ENST00000624530 922 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 AL132796.3-201ENST00000624703 900 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.91□□□□□ -1.46
SUMO3P55854 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.91□□□□□ -1.46
SUMO3P55854 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.91□□□□□ -1.46
SUMO3P55854 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.91□□□□□ -1.46
SUMO3P55854 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
SUMO3P55854 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.91□□□□□ -1.46
SUMO3P55854 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.91□□□□□ -1.46
SUMO3P55854 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.91□□□□□ -1.46
SUMO3P55854 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SUMO3P55854 AC125238.2-201ENST00000430003 1440 ntBASIC5.91□□□□□ -1.46
SUMO3P55854 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
SUMO3P55854 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SUMO3P55854 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SUMO3P55854 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.9□□□□□ -1.46
SUMO3P55854 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
SUMO3P55854 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.9□□□□□ -1.46
SUMO3P55854 AC105235.1-201ENST00000623208 1816 ntBASIC5.9□□□□□ -1.46
SUMO3P55854 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms