Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.81□□□□□ -1.48
CDH13P55290 AC078899.1-201ENST00000521432 1185 ntBASIC5.81□□□□□ -1.48
CDH13P55290 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH13P55290 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH13P55290 AC009268.1-201ENST00000561352 1203 ntBASIC5.81□□□□□ -1.48
CDH13P55290 AC007346.2-201ENST00000564816 892 ntBASIC5.81□□□□□ -1.48
CDH13P55290 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH13P55290 MRPS21P8-201ENST00000569196 235 ntBASIC5.81□□□□□ -1.48
CDH13P55290 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH13P55290 MIR5010-201ENST00000582846 120 ntBASIC5.81□□□□□ -1.48
CDH13P55290 NPM1P45-201ENST00000583151 559 ntBASIC5.81□□□□□ -1.48
CDH13P55290 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH13P55290 FAM60CP-201ENST00000591086 664 ntBASIC5.81□□□□□ -1.48
CDH13P55290 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH13P55290 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH13P55290 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH13P55290 AL080312.2-201ENST00000613001 630 ntBASIC5.81□□□□□ -1.48
CDH13P55290 AL355974.3-201ENST00000617383 467 ntBASIC5.81□□□□□ -1.48
CDH13P55290 AL353684.1-201ENST00000622677 1120 ntBASIC5.81□□□□□ -1.48
CDH13P55290 AL357562.1-201ENST00000624911 609 ntBASIC5.81□□□□□ -1.48
CDH13P55290 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.81□□□□□ -1.48
CDH13P55290 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH13P55290 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH13P55290 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CDH13P55290 Z83820.1-201ENST00000456978 1499 ntBASIC5.81□□□□□ -1.48
CDH13P55290 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH13P55290 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH13P55290 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH13P55290 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH13P55290 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH13P55290 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CDH13P55290 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
CDH13P55290 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.81□□□□□ -1.48
CDH13P55290 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.81□□□□□ -1.48
CDH13P55290 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH13P55290 AL355488.2-201ENST00000609909 2850 ntBASIC5.81□□□□□ -1.48
CDH13P55290 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH13P55290 AC087516.1-201ENST00000561236 2428 ntBASIC5.8□□□□□ -1.48
CDH13P55290 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH13P55290 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH13P55290 NLRP3P1-201ENST00000622303 1785 ntBASIC5.8□□□□□ -1.48
CDH13P55290 AC004656.1-201ENST00000568479 4951 ntBASIC5.8□□□□□ -1.48
CDH13P55290 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH13P55290 AC232271.1-201ENST00000602455 2715 ntBASIC5.8□□□□□ -1.48
CDH13P55290 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH13P55290 RNU1-134P-201ENST00000362935 165 ntBASIC5.8□□□□□ -1.48
CDH13P55290 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH13P55290 MIR188-201ENST00000385034 86 ntBASIC5.8□□□□□ -1.48
CDH13P55290 SNRPEP6-201ENST00000407465 277 ntBASIC5.8□□□□□ -1.48
CDH13P55290 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH13P55290 RCC2P2-201ENST00000422174 918 ntBASIC5.8□□□□□ -1.48
CDH13P55290 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH13P55290 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH13P55290 RPL5P10-201ENST00000445207 894 ntBASIC5.8□□□□□ -1.48
CDH13P55290 FTLP8-201ENST00000446770 267 ntBASIC5.8□□□□□ -1.48
CDH13P55290 REG1CP-206ENST00000447469 496 ntBASIC5.8□□□□□ -1.48
CDH13P55290 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH13P55290 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH13P55290 RPL31P53-201ENST00000457065 348 ntBASIC5.8□□□□□ -1.48
CDH13P55290 AC104164.1-201ENST00000460282 590 ntBASIC5.8□□□□□ -1.48
CDH13P55290 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH13P55290 AC093719.1-201ENST00000480427 441 ntBASIC5.8□□□□□ -1.48
CDH13P55290 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH13P55290 RPL38P3-201ENST00000484463 213 ntBASIC5.8□□□□□ -1.48
CDH13P55290 AC083795.1-201ENST00000491760 320 ntBASIC5.8□□□□□ -1.48
CDH13P55290 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH13P55290 GUSBP9-201ENST00000510138 584 ntBASIC5.8□□□□□ -1.48
CDH13P55290 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH13P55290 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH13P55290 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH13P55290 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH13P55290 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH13P55290 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH13P55290 WBP1LP11-201ENST00000586141 328 ntBASIC5.8□□□□□ -1.48
CDH13P55290 AP001357.1-201ENST00000586304 1053 ntBASIC5.8□□□□□ -1.48
CDH13P55290 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH13P55290 AL135999.3-201ENST00000610501 812 ntBASIC5.8□□□□□ -1.48
CDH13P55290 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH13P55290 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.8□□□□□ -1.48
CDH13P55290 AL512652.1-201ENST00000619006 500 ntBASIC5.8□□□□□ -1.48
CDH13P55290 AC000095.2-202ENST00000637415 154 ntBASIC5.8□□□□□ -1.48
CDH13P55290 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH13P55290 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH13P55290 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH13P55290 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH13P55290 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH13P55290 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH13P55290 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH13P55290 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH13P55290 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
CDH13P55290 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH13P55290 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH13P55290 AC140134.1-201ENST00000511830 3544 ntBASIC5.79□□□□□ -1.48
CDH13P55290 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH13P55290 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH13P55290 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH13P55290 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
CDH13P55290 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH13P55290 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CDH13P55290 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms