Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.14□□□□□ -1.43
LIMK1P53667 AC125336.1-201ENST00000508893 2827 ntBASIC6.14□□□□□ -1.43
LIMK1P53667 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
LIMK1P53667 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.14□□□□□ -1.43
LIMK1P53667 AC006511.3-201ENST00000624929 1783 ntBASIC6.14□□□□□ -1.43
LIMK1P53667 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LIMK1P53667 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
LIMK1P53667 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
LIMK1P53667 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.14□□□□□ -1.43
LIMK1P53667 AC245060.4-201ENST00000413293 1121 ntBASIC6.14□□□□□ -1.43
LIMK1P53667 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LIMK1P53667 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.14□□□□□ -1.43
LIMK1P53667 AC093155.2-201ENST00000420734 937 ntBASIC6.14□□□□□ -1.43
LIMK1P53667 RPL34P3-201ENST00000421454 338 ntBASIC6.14□□□□□ -1.43
LIMK1P53667 PCBP2P1-201ENST00000437262 977 ntBASIC6.14□□□□□ -1.43
LIMK1P53667 AL512605.1-202ENST00000441919 381 ntBASIC6.14□□□□□ -1.43
LIMK1P53667 AL359955.2-201ENST00000445380 353 ntBASIC6.14□□□□□ -1.43
LIMK1P53667 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.14□□□□□ -1.43
LIMK1P53667 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.14□□□□□ -1.43
LIMK1P53667 AL139156.3-201ENST00000454802 394 ntBASIC6.14□□□□□ -1.43
LIMK1P53667 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.14□□□□□ -1.43
LIMK1P53667 SNORA58-201ENST00000505219 137 ntBASIC6.14□□□□□ -1.43
LIMK1P53667 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.14□□□□□ -1.43
LIMK1P53667 RN7SKP248-201ENST00000516278 305 ntBASIC6.14□□□□□ -1.43
LIMK1P53667 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.14□□□□□ -1.43
LIMK1P53667 AC008676.3-201ENST00000521237 435 ntBASIC6.14□□□□□ -1.43
LIMK1P53667 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.14□□□□□ -1.43
LIMK1P53667 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.14□□□□□ -1.43
LIMK1P53667 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.14□□□□□ -1.43
LIMK1P53667 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.14□□□□□ -1.43
LIMK1P53667 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.14□□□□□ -1.43
LIMK1P53667 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.14□□□□□ -1.43
LIMK1P53667 SNORA35B-201ENST00000607417 129 ntBASIC6.14□□□□□ -1.43
LIMK1P53667 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.14□□□□□ -1.43
LIMK1P53667 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.14□□□□□ -1.43
LIMK1P53667 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.14□□□□□ -1.43
LIMK1P53667 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
LIMK1P53667 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
LIMK1P53667 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.14□□□□□ -1.43
LIMK1P53667 SAGE3P-201ENST00000619800 1635 ntBASIC6.14□□□□□ -1.43
LIMK1P53667 MTND5P23-201ENST00000430812 1655 ntBASIC6.14□□□□□ -1.43
LIMK1P53667 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
LIMK1P53667 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LIMK1P53667 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.13□□□□□ -1.43
LIMK1P53667 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LIMK1P53667 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LIMK1P53667 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LIMK1P53667 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.13□□□□□ -1.43
LIMK1P53667 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LIMK1P53667 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
LIMK1P53667 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LIMK1P53667 U3.7-201ENST00000363668 216 ntBASIC6.13□□□□□ -1.43
LIMK1P53667 OR2W4P-201ENST00000406496 926 ntBASIC6.13□□□□□ -1.43
LIMK1P53667 RN7SKP121-201ENST00000410842 305 ntBASIC6.13□□□□□ -1.43
LIMK1P53667 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.13□□□□□ -1.43
LIMK1P53667 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.13□□□□□ -1.43
LIMK1P53667 PTP4A1P1-201ENST00000420539 515 ntBASIC6.13□□□□□ -1.43
LIMK1P53667 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.13□□□□□ -1.43
LIMK1P53667 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.13□□□□□ -1.43
LIMK1P53667 TRIM60P16-201ENST00000444048 694 ntBASIC6.13□□□□□ -1.43
LIMK1P53667 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.13□□□□□ -1.43
LIMK1P53667 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LIMK1P53667 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.13□□□□□ -1.43
LIMK1P53667 RN7SL466P-201ENST00000497546 295 ntBASIC6.13□□□□□ -1.43
LIMK1P53667 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
LIMK1P53667 AP001960.1-201ENST00000506494 658 ntBASIC6.13□□□□□ -1.43
LIMK1P53667 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.13□□□□□ -1.43
LIMK1P53667 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.13□□□□□ -1.43
LIMK1P53667 CYCSP22-201ENST00000517555 339 ntBASIC6.13□□□□□ -1.43
LIMK1P53667 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
LIMK1P53667 AC022784.5-201ENST00000522241 437 ntBASIC6.13□□□□□ -1.43
LIMK1P53667 AC025857.1-201ENST00000525252 377 ntBASIC6.13□□□□□ -1.43
LIMK1P53667 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.13□□□□□ -1.43
LIMK1P53667 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.13□□□□□ -1.43
LIMK1P53667 AP005119.1-201ENST00000580956 292 ntBASIC6.13□□□□□ -1.43
LIMK1P53667 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LIMK1P53667 AC104695.2-201ENST00000605056 775 ntBASIC6.13□□□□□ -1.43
LIMK1P53667 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.13□□□□□ -1.43
LIMK1P53667 AC096586.2-201ENST00000610260 441 ntBASIC6.13□□□□□ -1.43
LIMK1P53667 AC010998.3-201ENST00000613871 631 ntBASIC6.13□□□□□ -1.43
LIMK1P53667 AL035661.1-201ENST00000620459 1144 ntBASIC6.13□□□□□ -1.43
LIMK1P53667 AL691477.1-201ENST00000624398 162 ntBASIC6.13□□□□□ -1.43
LIMK1P53667 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.13□□□□□ -1.43
LIMK1P53667 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.13□□□□□ -1.43
LIMK1P53667 CASC19-222ENST00000641321 1173 ntBASIC6.13□□□□□ -1.43
LIMK1P53667 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.13□□□□□ -1.43
LIMK1P53667 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.13□□□□□ -1.43
LIMK1P53667 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LIMK1P53667 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.13□□□□□ -1.43
LIMK1P53667 AF287957.1-201ENST00000607368 1595 ntBASIC6.13□□□□□ -1.43
LIMK1P53667 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LIMK1P53667 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LIMK1P53667 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
LIMK1P53667 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LIMK1P53667 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LIMK1P53667 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
LIMK1P53667 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.13□□□□□ -1.43
LIMK1P53667 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
LIMK1P53667 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
LIMK1P53667 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms