Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 HMGN2P6-201ENST00000551091 273 ntBASIC7.05□□□□□ -1.28
NUP98P52948 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.05□□□□□ -1.28
NUP98P52948 FKBP1AP1-201ENST00000594588 318 ntBASIC7.05□□□□□ -1.28
NUP98P52948 AC109583.2-201ENST00000617367 129 ntBASIC7.05□□□□□ -1.28
NUP98P52948 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NUP98P52948 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
NUP98P52948 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NUP98P52948 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
NUP98P52948 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.05□□□□□ -1.28
NUP98P52948 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NUP98P52948 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
NUP98P52948 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NUP98P52948 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.04□□□□□ -1.28
NUP98P52948 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NUP98P52948 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NUP98P52948 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NUP98P52948 AC005294.1-201ENST00000355509 281 ntBASIC7.04□□□□□ -1.28
NUP98P52948 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP98P52948 OTX2P1-201ENST00000450956 354 ntBASIC7.04□□□□□ -1.28
NUP98P52948 SLC25A51P1-201ENST00000468432 871 ntBASIC7.04□□□□□ -1.28
NUP98P52948 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC7.04□□□□□ -1.28
NUP98P52948 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
NUP98P52948 AC015720.2-201ENST00000567709 334 ntBASIC7.04□□□□□ -1.28
NUP98P52948 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP98P52948 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP98P52948 AL683813.2-201ENST00000605245 502 ntBASIC7.04□□□□□ -1.28
NUP98P52948 MIR6837-201ENST00000620884 64 ntBASIC7.04□□□□□ -1.28
NUP98P52948 AL034549.2-201ENST00000618285 3373 ntBASIC7.04□□□□□ -1.28
NUP98P52948 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC7.04□□□□□ -1.28
NUP98P52948 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
NUP98P52948 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
NUP98P52948 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
NUP98P52948 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC7.04□□□□□ -1.28
NUP98P52948 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.04□□□□□ -1.28
NUP98P52948 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.04□□□□□ -1.28
NUP98P52948 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NUP98P52948 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NUP98P52948 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
NUP98P52948 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
NUP98P52948 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
NUP98P52948 AL121886.1-201ENST00000358609 435 ntBASIC7.04□□□□□ -1.28
NUP98P52948 RNA5SP91-201ENST00000390902 119 ntBASIC7.04□□□□□ -1.28
NUP98P52948 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC7.04□□□□□ -1.28
NUP98P52948 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.04□□□□□ -1.28
NUP98P52948 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP98P52948 CBX1P5-201ENST00000475330 559 ntBASIC7.04□□□□□ -1.28
NUP98P52948 RPSAP50-201ENST00000481955 852 ntBASIC7.04□□□□□ -1.28
NUP98P52948 AC090638.1-201ENST00000498296 909 ntBASIC7.04□□□□□ -1.28
NUP98P52948 AC023818.1-201ENST00000498379 384 ntBASIC7.04□□□□□ -1.28
NUP98P52948 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP98P52948 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP98P52948 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.04□□□□□ -1.28
NUP98P52948 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP98P52948 AC044860.2-201ENST00000561005 179 ntBASIC7.04□□□□□ -1.28
NUP98P52948 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUP98P52948 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NUP98P52948 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUP98P52948 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUP98P52948 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
NUP98P52948 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.03□□□□□ -1.28
NUP98P52948 OFD1P17-201ENST00000437639 3018 ntBASIC7.03□□□□□ -1.28
NUP98P52948 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
NUP98P52948 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NUP98P52948 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC7.03□□□□□ -1.28
NUP98P52948 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUP98P52948 RNA5SP514-201ENST00000363717 111 ntBASIC7.03□□□□□ -1.28
NUP98P52948 MIR223-201ENST00000385204 110 ntBASIC7.03□□□□□ -1.28
NUP98P52948 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC7.03□□□□□ -1.28
NUP98P52948 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7.03□□□□□ -1.28
NUP98P52948 RPL7L1P9-201ENST00000431298 745 ntBASIC7.03□□□□□ -1.28
NUP98P52948 AC073410.1-201ENST00000435125 589 ntBASIC7.03□□□□□ -1.28
NUP98P52948 RPL12P39-201ENST00000455456 496 ntBASIC7.03□□□□□ -1.28
NUP98P52948 RN7SL30P-201ENST00000488416 306 ntBASIC7.03□□□□□ -1.28
NUP98P52948 TOMM22P4-201ENST00000511318 336 ntBASIC7.03□□□□□ -1.28
NUP98P52948 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.03□□□□□ -1.28
NUP98P52948 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC7.03□□□□□ -1.28
NUP98P52948 OR11J2P-201ENST00000555298 907 ntBASIC7.03□□□□□ -1.28
NUP98P52948 AC087783.2-201ENST00000605070 562 ntBASIC7.03□□□□□ -1.28
NUP98P52948 AL136295.6-201ENST00000610486 658 ntBASIC7.03□□□□□ -1.28
NUP98P52948 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUP98P52948 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NUP98P52948 HYDIN2-203ENST00000614586 13885 ntBASIC7.03□□□□□ -1.28
NUP98P52948 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
NUP98P52948 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
NUP98P52948 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
NUP98P52948 WBP11P1-201ENST00000562560 1931 ntBASIC7.02□□□□□ -1.28
NUP98P52948 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
NUP98P52948 ZNF840P-201ENST00000504759 1996 ntBASIC7.02□□□□□ -1.29
NUP98P52948 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NUP98P52948 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.02□□□□□ -1.29
NUP98P52948 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC7.02□□□□□ -1.29
NUP98P52948 AK3P5-201ENST00000432033 519 ntBASIC7.02□□□□□ -1.29
NUP98P52948 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC7.02□□□□□ -1.29
NUP98P52948 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.02□□□□□ -1.29
NUP98P52948 RPS17P5-201ENST00000498293 408 ntBASIC7.02□□□□□ -1.29
NUP98P52948 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC7.02□□□□□ -1.29
NUP98P52948 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC7.02□□□□□ -1.29
NUP98P52948 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC7.02□□□□□ -1.29
NUP98P52948 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC7.02□□□□□ -1.29
NUP98P52948 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms