Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SLC1A1P43005 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SLC1A1P43005 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
SLC1A1P43005 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SLC1A1P43005 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
SLC1A1P43005 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
SLC1A1P43005 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
SLC1A1P43005 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SLC1A1P43005 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.08□□□□□ -1.44
SLC1A1P43005 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
SLC1A1P43005 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SLC1A1P43005 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SLC1A1P43005 AC121334.1-201ENST00000396414 802 ntBASIC6.08□□□□□ -1.44
SLC1A1P43005 GCNT1P4-201ENST00000404096 329 ntBASIC6.08□□□□□ -1.44
SLC1A1P43005 RN7SKP86-201ENST00000410454 332 ntBASIC6.08□□□□□ -1.44
SLC1A1P43005 OR10T1P-201ENST00000424327 947 ntBASIC6.08□□□□□ -1.44
SLC1A1P43005 BX276092.6-201ENST00000430476 250 ntBASIC6.08□□□□□ -1.44
SLC1A1P43005 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.08□□□□□ -1.44
SLC1A1P43005 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.08□□□□□ -1.44
SLC1A1P43005 BX276092.8-201ENST00000455722 250 ntBASIC6.08□□□□□ -1.44
SLC1A1P43005 Z83838.1-202ENST00000456225 839 ntBASIC6.08□□□□□ -1.44
SLC1A1P43005 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.08□□□□□ -1.44
SLC1A1P43005 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.08□□□□□ -1.44
SLC1A1P43005 RN7SL612P-201ENST00000497704 295 ntBASIC6.08□□□□□ -1.44
SLC1A1P43005 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.08□□□□□ -1.44
SLC1A1P43005 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.08□□□□□ -1.44
SLC1A1P43005 GAPDHP71-201ENST00000511530 1003 ntBASIC6.08□□□□□ -1.44
SLC1A1P43005 GAPDHP62-201ENST00000515313 990 ntBASIC6.08□□□□□ -1.44
SLC1A1P43005 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.08□□□□□ -1.44
SLC1A1P43005 AC124916.2-201ENST00000604416 224 ntBASIC6.08□□□□□ -1.44
SLC1A1P43005 AC092266.1-201ENST00000610958 165 ntBASIC6.08□□□□□ -1.44
SLC1A1P43005 AL035661.1-201ENST00000620459 1144 ntBASIC6.08□□□□□ -1.44
SLC1A1P43005 AC111152.1-202ENST00000635848 339 ntBASIC6.08□□□□□ -1.44
SLC1A1P43005 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SLC1A1P43005 BCORP1-203ENST00000513194 5093 ntBASIC6.08□□□□□ -1.44
SLC1A1P43005 UGT2B24P-201ENST00000514441 1597 ntBASIC6.08□□□□□ -1.44
SLC1A1P43005 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SLC1A1P43005 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SLC1A1P43005 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.08□□□□□ -1.44
SLC1A1P43005 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SLC1A1P43005 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SLC1A1P43005 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SLC1A1P43005 MFSD8-219ENST00000641228 2559 ntBASIC6.08□□□□□ -1.44
SLC1A1P43005 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SLC1A1P43005 AC093225.1-201ENST00000506867 1408 ntBASIC6.08□□□□□ -1.44
SLC1A1P43005 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.07□□□□□ -1.44
SLC1A1P43005 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.07□□□□□ -1.44
SLC1A1P43005 AL354854.1-201ENST00000455940 1363 ntBASIC6.07□□□□□ -1.44
SLC1A1P43005 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.07□□□□□ -1.44
SLC1A1P43005 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC1A1P43005 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SLC1A1P43005 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC1A1P43005 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.07□□□□□ -1.44
SLC1A1P43005 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SLC1A1P43005 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC1A1P43005 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SLC1A1P43005 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SLC1A1P43005 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.07□□□□□ -1.44
SLC1A1P43005 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.07□□□□□ -1.44
SLC1A1P43005 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.07□□□□□ -1.44
SLC1A1P43005 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SLC1A1P43005 AC099670.2-201ENST00000435130 321 ntBASIC6.07□□□□□ -1.44
SLC1A1P43005 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.07□□□□□ -1.44
SLC1A1P43005 OR7E116P-201ENST00000448529 957 ntBASIC6.07□□□□□ -1.44
SLC1A1P43005 AC009963.3-201ENST00000458090 486 ntBASIC6.07□□□□□ -1.44
SLC1A1P43005 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SLC1A1P43005 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.07□□□□□ -1.44
SLC1A1P43005 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.07□□□□□ -1.44
SLC1A1P43005 AC074255.1-201ENST00000511259 501 ntBASIC6.07□□□□□ -1.44
SLC1A1P43005 AC097486.1-201ENST00000515331 210 ntBASIC6.07□□□□□ -1.44
SLC1A1P43005 AC021146.10-201ENST00000515628 706 ntBASIC6.07□□□□□ -1.44
SLC1A1P43005 IGKV3D-25-201ENST00000519599 235 ntBASIC6.07□□□□□ -1.44
SLC1A1P43005 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC6.07□□□□□ -1.44
SLC1A1P43005 AP003396.4-201ENST00000527574 265 ntBASIC6.07□□□□□ -1.44
SLC1A1P43005 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.07□□□□□ -1.44
SLC1A1P43005 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.07□□□□□ -1.44
SLC1A1P43005 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SLC1A1P43005 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.07□□□□□ -1.44
SLC1A1P43005 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.07□□□□□ -1.44
SLC1A1P43005 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SLC1A1P43005 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.07□□□□□ -1.44
SLC1A1P43005 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.07□□□□□ -1.44
SLC1A1P43005 AC005828.7-201ENST00000607331 556 ntBASIC6.07□□□□□ -1.44
SLC1A1P43005 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
SLC1A1P43005 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.07□□□□□ -1.44
SLC1A1P43005 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
SLC1A1P43005 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC1A1P43005 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SLC1A1P43005 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SLC1A1P43005 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC1A1P43005 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC1A1P43005 AC027279.4-201ENST00000624371 2072 ntBASIC6.06□□□□□ -1.44
SLC1A1P43005 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SLC1A1P43005 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.06□□□□□ -1.44
SLC1A1P43005 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SLC1A1P43005 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.06□□□□□ -1.44
SLC1A1P43005 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SLC1A1P43005 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SLC1A1P43005 RNA5SP279-201ENST00000365513 117 ntBASIC6.06□□□□□ -1.44
SLC1A1P43005 MIR130B-202ENST00000385018 82 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms