Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
RFC3P40938 AC004656.1-201ENST00000568479 4951 ntBASIC5.5□□□□□ -1.53
RFC3P40938 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFC3P40938 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFC3P40938 OR10R3P-201ENST00000361688 942 ntBASIC5.5□□□□□ -1.53
RFC3P40938 RN7SKP77-201ENST00000363261 353 ntBASIC5.5□□□□□ -1.53
RFC3P40938 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.5□□□□□ -1.53
RFC3P40938 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RFC3P40938 RNA5SP284-201ENST00000384547 118 ntBASIC5.5□□□□□ -1.53
RFC3P40938 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RFC3P40938 AL096800.1-201ENST00000405326 893 ntBASIC5.5□□□□□ -1.53
RFC3P40938 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.5□□□□□ -1.53
RFC3P40938 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.5□□□□□ -1.53
RFC3P40938 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RFC3P40938 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.5□□□□□ -1.53
RFC3P40938 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.5□□□□□ -1.53
RFC3P40938 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.5□□□□□ -1.53
RFC3P40938 RPL31P15-201ENST00000449770 338 ntBASIC5.5□□□□□ -1.53
RFC3P40938 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.5□□□□□ -1.53
RFC3P40938 RN7SL269P-201ENST00000467795 305 ntBASIC5.5□□□□□ -1.53
RFC3P40938 SETP21-201ENST00000514799 892 ntBASIC5.5□□□□□ -1.53
RFC3P40938 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.5□□□□□ -1.53
RFC3P40938 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.5□□□□□ -1.53
RFC3P40938 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RFC3P40938 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.5□□□□□ -1.53
RFC3P40938 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.5□□□□□ -1.53
RFC3P40938 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.5□□□□□ -1.53
RFC3P40938 AC007494.1-201ENST00000562293 760 ntBASIC5.5□□□□□ -1.53
RFC3P40938 MIR4776-2-201ENST00000580204 80 ntBASIC5.5□□□□□ -1.53
RFC3P40938 AC005244.1-201ENST00000582566 339 ntBASIC5.5□□□□□ -1.53
RFC3P40938 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.5□□□□□ -1.53
RFC3P40938 AL021368.3-201ENST00000607119 578 ntBASIC5.5□□□□□ -1.53
RFC3P40938 MIR6793-201ENST00000612376 63 ntBASIC5.5□□□□□ -1.53
RFC3P40938 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.5□□□□□ -1.53
RFC3P40938 AC003992.1-201ENST00000635364 557 ntBASIC5.5□□□□□ -1.53
RFC3P40938 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RFC3P40938 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RFC3P40938 AC110373.1-201ENST00000505994 3505 ntBASIC5.5□□□□□ -1.53
RFC3P40938 AC096921.2-201ENST00000561507 1916 ntBASIC5.5□□□□□ -1.53
RFC3P40938 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RFC3P40938 AC125336.1-201ENST00000508893 2827 ntBASIC5.5□□□□□ -1.53
RFC3P40938 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RFC3P40938 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
RFC3P40938 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.5□□□□□ -1.53
RFC3P40938 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RFC3P40938 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFC3P40938 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.49□□□□□ -1.53
RFC3P40938 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFC3P40938 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RFC3P40938 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFC3P40938 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RFC3P40938 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFC3P40938 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.49□□□□□ -1.53
RFC3P40938 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
RFC3P40938 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RFC3P40938 MIR1203-201ENST00000408812 85 ntBASIC5.49□□□□□ -1.53
RFC3P40938 RPS15AP30-201ENST00000420976 390 ntBASIC5.49□□□□□ -1.53
RFC3P40938 GAPDHP75-201ENST00000433910 943 ntBASIC5.49□□□□□ -1.53
RFC3P40938 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.49□□□□□ -1.53
RFC3P40938 RPL23AP19-201ENST00000436229 369 ntBASIC5.49□□□□□ -1.53
RFC3P40938 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.49□□□□□ -1.53
RFC3P40938 TRIM60P16-201ENST00000444048 694 ntBASIC5.49□□□□□ -1.53
RFC3P40938 AP006222.1-205ENST00000450734 457 ntBASIC5.49□□□□□ -1.53
RFC3P40938 AC103563.5-201ENST00000455643 364 ntBASIC5.49□□□□□ -1.53
RFC3P40938 AC112187.1-201ENST00000455837 479 ntBASIC5.49□□□□□ -1.53
RFC3P40938 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.49□□□□□ -1.53
RFC3P40938 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.49□□□□□ -1.53
RFC3P40938 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RFC3P40938 AC097486.1-201ENST00000515331 210 ntBASIC5.49□□□□□ -1.53
RFC3P40938 SCARNA18.1-201ENST00000516330 83 ntBASIC5.49□□□□□ -1.53
RFC3P40938 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RFC3P40938 OR56A7P-201ENST00000524865 941 ntBASIC5.49□□□□□ -1.53
RFC3P40938 AC027544.3-201ENST00000535082 757 ntBASIC5.49□□□□□ -1.53
RFC3P40938 HMGN2P47-201ENST00000559378 272 ntBASIC5.49□□□□□ -1.53
RFC3P40938 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.49□□□□□ -1.53
RFC3P40938 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.49□□□□□ -1.53
RFC3P40938 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RFC3P40938 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.49□□□□□ -1.53
RFC3P40938 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.49□□□□□ -1.53
RFC3P40938 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RFC3P40938 AC020916.2-201ENST00000591242 360 ntBASIC5.49□□□□□ -1.53
RFC3P40938 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.49□□□□□ -1.53
RFC3P40938 uc_338.26-201ENST00000612659 160 ntBASIC5.49□□□□□ -1.53
RFC3P40938 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.49□□□□□ -1.53
RFC3P40938 AC096861.1-201ENST00000616652 240 ntBASIC5.49□□□□□ -1.53
RFC3P40938 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.49□□□□□ -1.53
RFC3P40938 NEPNP-201ENST00000404786 1371 ntBASIC5.49□□□□□ -1.53
RFC3P40938 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
RFC3P40938 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RFC3P40938 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.49□□□□□ -1.53
RFC3P40938 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RFC3P40938 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFC3P40938 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RFC3P40938 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.49□□□□□ -1.53
RFC3P40938 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RFC3P40938 AC092451.3-201ENST00000625067 1343 ntBASIC5.48□□□□□ -1.53
RFC3P40938 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RFC3P40938 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RFC3P40938 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.48□□□□□ -1.53
RFC3P40938 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms