Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.87□□□□□ -1.47
HMGCLP35914 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HMGCLP35914 AC015799.1-201ENST00000622996 3122 ntBASIC5.87□□□□□ -1.47
HMGCLP35914 AC140134.1-201ENST00000511830 3544 ntBASIC5.87□□□□□ -1.47
HMGCLP35914 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
HMGCLP35914 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGCLP35914 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGCLP35914 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGCLP35914 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
HMGCLP35914 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGCLP35914 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGCLP35914 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGCLP35914 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HMGCLP35914 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGCLP35914 PDZK1P1-202ENST00000425209 1350 ntBASIC5.86□□□□□ -1.47
HMGCLP35914 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HMGCLP35914 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGCLP35914 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HMGCLP35914 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HMGCLP35914 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGCLP35914 RNU1-150P-201ENST00000362491 162 ntBASIC5.86□□□□□ -1.47
HMGCLP35914 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HMGCLP35914 RN7SKP240-201ENST00000410583 375 ntBASIC5.86□□□□□ -1.47
HMGCLP35914 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGCLP35914 USP24P1-201ENST00000433802 779 ntBASIC5.86□□□□□ -1.47
HMGCLP35914 EIF5AP4-201ENST00000441206 465 ntBASIC5.86□□□□□ -1.47
HMGCLP35914 AC023141.8-201ENST00000442554 208 ntBASIC5.86□□□□□ -1.47
HMGCLP35914 AL157777.1-201ENST00000468100 304 ntBASIC5.86□□□□□ -1.47
HMGCLP35914 AC079080.1-201ENST00000479841 822 ntBASIC5.86□□□□□ -1.47
HMGCLP35914 RN7SL57P-201ENST00000493687 290 ntBASIC5.86□□□□□ -1.47
HMGCLP35914 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGCLP35914 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGCLP35914 AL138895.2-201ENST00000603019 178 ntBASIC5.86□□□□□ -1.47
HMGCLP35914 AC067773.1-201ENST00000603284 1094 ntBASIC5.86□□□□□ -1.47
HMGCLP35914 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.86□□□□□ -1.47
HMGCLP35914 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGCLP35914 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGCLP35914 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGCLP35914 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGCLP35914 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGCLP35914 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGCLP35914 AL161912.4-201ENST00000623889 2468 ntBASIC5.86□□□□□ -1.47
HMGCLP35914 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGCLP35914 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGCLP35914 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGCLP35914 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HMGCLP35914 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCLP35914 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
HMGCLP35914 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCLP35914 AC012078.1-201ENST00000405035 1646 ntBASIC5.85□□□□□ -1.47
HMGCLP35914 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGCLP35914 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCLP35914 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HMGCLP35914 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.85□□□□□ -1.47
HMGCLP35914 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGCLP35914 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCLP35914 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCLP35914 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGCLP35914 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGCLP35914 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HMGCLP35914 NPM1P37-201ENST00000403105 874 ntBASIC5.85□□□□□ -1.47
HMGCLP35914 MIR1203-201ENST00000408812 85 ntBASIC5.85□□□□□ -1.47
HMGCLP35914 AL035660.1-201ENST00000422041 222 ntBASIC5.85□□□□□ -1.47
HMGCLP35914 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.85□□□□□ -1.47
HMGCLP35914 DEFA9P-201ENST00000433042 285 ntBASIC5.85□□□□□ -1.47
HMGCLP35914 BX679664.2-201ENST00000439282 283 ntBASIC5.85□□□□□ -1.47
HMGCLP35914 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGCLP35914 RNU1-88P-201ENST00000459274 128 ntBASIC5.85□□□□□ -1.47
HMGCLP35914 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCLP35914 AC078899.1-201ENST00000521432 1185 ntBASIC5.85□□□□□ -1.47
HMGCLP35914 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGCLP35914 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGCLP35914 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.85□□□□□ -1.47
HMGCLP35914 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGCLP35914 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.85□□□□□ -1.47
HMGCLP35914 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGCLP35914 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.85□□□□□ -1.47
HMGCLP35914 OR11H2-202ENST00000641517 1085 ntBASIC5.85□□□□□ -1.47
HMGCLP35914 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCLP35914 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCLP35914 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCLP35914 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCLP35914 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.85□□□□□ -1.47
HMGCLP35914 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HMGCLP35914 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCLP35914 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HMGCLP35914 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMGCLP35914 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HMGCLP35914 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
HMGCLP35914 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGCLP35914 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMGCLP35914 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.84□□□□□ -1.47
HMGCLP35914 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
HMGCLP35914 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMGCLP35914 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMGCLP35914 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HMGCLP35914 RNA5SP500-201ENST00000364486 119 ntBASIC5.84□□□□□ -1.47
HMGCLP35914 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
HMGCLP35914 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HMGCLP35914 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms