Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC073488.3-201ENST00000631611 778 ntBASIC6.32□□□□□ -1.4
RFC1P35251 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RFC1P35251 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RFC1P35251 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RFC1P35251 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
RFC1P35251 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RFC1P35251 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
RFC1P35251 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
RFC1P35251 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RFC1P35251 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RFC1P35251 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
RFC1P35251 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.31□□□□□ -1.4
RFC1P35251 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.31□□□□□ -1.4
RFC1P35251 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFC1P35251 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.31□□□□□ -1.4
RFC1P35251 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFC1P35251 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFC1P35251 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.31□□□□□ -1.4
RFC1P35251 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.31□□□□□ -1.4
RFC1P35251 RNA5SP232-201ENST00000364144 119 ntBASIC6.31□□□□□ -1.4
RFC1P35251 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFC1P35251 AL096800.1-201ENST00000405326 893 ntBASIC6.31□□□□□ -1.4
RFC1P35251 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.31□□□□□ -1.4
RFC1P35251 AC245096.1-201ENST00000413104 546 ntBASIC6.31□□□□□ -1.4
RFC1P35251 RPS26P38-201ENST00000414476 348 ntBASIC6.31□□□□□ -1.4
RFC1P35251 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.31□□□□□ -1.4
RFC1P35251 NME1P1-201ENST00000420914 382 ntBASIC6.31□□□□□ -1.4
RFC1P35251 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.31□□□□□ -1.4
RFC1P35251 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC6.31□□□□□ -1.4
RFC1P35251 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RFC1P35251 CUBNP2-201ENST00000443534 1139 ntBASIC6.31□□□□□ -1.4
RFC1P35251 TRIM60P16-201ENST00000444048 694 ntBASIC6.31□□□□□ -1.4
RFC1P35251 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
RFC1P35251 MORF4L2P1-201ENST00000503761 858 ntBASIC6.31□□□□□ -1.4
RFC1P35251 RN7SKP35-201ENST00000517210 151 ntBASIC6.31□□□□□ -1.4
RFC1P35251 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFC1P35251 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.31□□□□□ -1.4
RFC1P35251 AL049779.3-201ENST00000557141 606 ntBASIC6.31□□□□□ -1.4
RFC1P35251 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.31□□□□□ -1.4
RFC1P35251 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.31□□□□□ -1.4
RFC1P35251 AC005014.3-201ENST00000605985 190 ntBASIC6.31□□□□□ -1.4
RFC1P35251 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.31□□□□□ -1.4
RFC1P35251 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RFC1P35251 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFC1P35251 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RFC1P35251 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
RFC1P35251 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.31□□□□□ -1.4
RFC1P35251 AC140479.2-201ENST00000421567 3130 ntBASIC6.31□□□□□ -1.4
RFC1P35251 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RFC1P35251 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.31□□□□□ -1.4
RFC1P35251 AL354854.1-201ENST00000455940 1363 ntBASIC6.31□□□□□ -1.4
RFC1P35251 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
RFC1P35251 MTCO1P22-201ENST00000604619 1360 ntBASIC6.31□□□□□ -1.4
RFC1P35251 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RFC1P35251 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFC1P35251 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.3□□□□□ -1.4
RFC1P35251 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
RFC1P35251 PSG10P-201ENST00000501199 1500 ntBASIC6.3□□□□□ -1.4
RFC1P35251 MTCO1P28-201ENST00000574177 1528 ntBASIC6.3□□□□□ -1.4
RFC1P35251 AC015799.1-201ENST00000622996 3122 ntBASIC6.3□□□□□ -1.4
RFC1P35251 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFC1P35251 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFC1P35251 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFC1P35251 GNG5P2-201ENST00000372054 207 ntBASIC6.3□□□□□ -1.4
RFC1P35251 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.3□□□□□ -1.4
RFC1P35251 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RFC1P35251 MYL6P5-201ENST00000412707 459 ntBASIC6.3□□□□□ -1.4
RFC1P35251 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.3□□□□□ -1.4
RFC1P35251 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.3□□□□□ -1.4
RFC1P35251 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.3□□□□□ -1.4
RFC1P35251 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.3□□□□□ -1.4
RFC1P35251 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6.3□□□□□ -1.4
RFC1P35251 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.3□□□□□ -1.4
RFC1P35251 AC104339.1-201ENST00000465478 348 ntBASIC6.3□□□□□ -1.4
RFC1P35251 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC6.3□□□□□ -1.4
RFC1P35251 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.3□□□□□ -1.4
RFC1P35251 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC6.3□□□□□ -1.4
RFC1P35251 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.3□□□□□ -1.4
RFC1P35251 HSD3BP3-201ENST00000514706 994 ntBASIC6.3□□□□□ -1.4
RFC1P35251 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.3□□□□□ -1.4
RFC1P35251 AC009879.1-201ENST00000520029 839 ntBASIC6.3□□□□□ -1.4
RFC1P35251 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.3□□□□□ -1.4
RFC1P35251 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC6.3□□□□□ -1.4
RFC1P35251 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.3□□□□□ -1.4
RFC1P35251 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.3□□□□□ -1.4
RFC1P35251 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFC1P35251 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.3□□□□□ -1.4
RFC1P35251 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.3□□□□□ -1.4
RFC1P35251 AC002519.2-203ENST00000567043 837 ntBASIC6.3□□□□□ -1.4
RFC1P35251 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.3□□□□□ -1.4
RFC1P35251 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.3□□□□□ -1.4
RFC1P35251 MIR3154-201ENST00000577829 84 ntBASIC6.3□□□□□ -1.4
RFC1P35251 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC6.3□□□□□ -1.4
RFC1P35251 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.3□□□□□ -1.4
RFC1P35251 AC092944.2-201ENST00000605443 889 ntBASIC6.3□□□□□ -1.4
RFC1P35251 FAM27E2-201ENST00000619668 403 ntBASIC6.3□□□□□ -1.4
RFC1P35251 AC106730.3-201ENST00000624568 641 ntBASIC6.3□□□□□ -1.4
RFC1P35251 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.3□□□□□ -1.4
RFC1P35251 CASC19-274ENST00000642018 970 ntBASIC6.3□□□□□ -1.4
RFC1P35251 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms