Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC12P31275 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC12P31275 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HOXC12P31275 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC6.47□□□□□ -1.37
HOXC12P31275 SAMMSON-203ENST00000641005 2168 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC12P31275 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HOXC12P31275 SEC63P2-201ENST00000503863 1939 ntBASIC6.46□□□□□ -1.37
HOXC12P31275 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
HOXC12P31275 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC12P31275 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC12P31275 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC12P31275 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
HOXC12P31275 AC034229.2-201ENST00000566945 2508 ntBASIC6.46□□□□□ -1.37
HOXC12P31275 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
HOXC12P31275 PSG10P-201ENST00000501199 1500 ntBASIC6.46□□□□□ -1.37
HOXC12P31275 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC6.46□□□□□ -1.37
HOXC12P31275 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC12P31275 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC12P31275 THAP12P7-201ENST00000520248 2290 ntBASIC6.46□□□□□ -1.37
HOXC12P31275 AC007406.5-201ENST00000570140 3170 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC12P31275 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXC12P31275 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
HOXC12P31275 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HOXC12P31275 PPIAP22-201ENST00000358455 498 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 Y_RNA.192-201ENST00000363977 102 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 SSX6-201ENST00000376932 562 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC12P31275 AP000357.1-201ENST00000409926 1165 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 RN7SKP166-201ENST00000410812 305 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 AC098592.1-201ENST00000419352 333 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 AC027644.1-201ENST00000419595 298 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 RPS7P12-201ENST00000422385 582 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 AC019178.2-201ENST00000423595 505 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXC12P31275 AL022324.2-201ENST00000434827 780 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 PIP5K1P2-201ENST00000437005 1120 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 NPM1P23-201ENST00000440193 849 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC12P31275 AC125232.1-201ENST00000452554 1408 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC12P31275 AC019080.2-201ENST00000453859 394 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC12P31275 USP9YP10-201ENST00000454868 628 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC12P31275 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXC12P31275 RN7SL649P-201ENST00000496974 275 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC12P31275 AC105420.1-201ENST00000504389 582 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC12P31275 AC021146.8-201ENST00000507455 733 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 AC010625.1-201ENST00000511296 403 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 USP9YP5-201ENST00000511770 630 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 AC114940.1-201ENST00000512162 1265 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
HOXC12P31275 IGHV3-63-201ENST00000518422 341 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.46□□□□□ -1.38
HOXC12P31275 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC12P31275 AP005597.2-201ENST00000526238 341 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 NDUFA3P2-201ENST00000531434 232 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 OR5F2P-201ENST00000532761 941 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC6.46□□□□□ -1.38
HOXC12P31275 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC12P31275 AC007115.1-201ENST00000546853 234 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXC12P31275 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC12P31275 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC12P31275 AC027807.1-201ENST00000559921 996 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 AC091932.1-201ENST00000569381 427 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 MTCO1P40-201ENST00000574371 625 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXC12P31275 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC12P31275 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXC12P31275 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC12P31275 AC103591.3-201ENST00000608684 209 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HOXC12P31275 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC12P31275 AC073114.1-201ENST00000612027 490 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HOXC12P31275 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC12P31275 uc_338.21-201ENST00000622458 147 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 AF246928.1-201ENST00000623768 87 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXC12P31275 AC135068.11-201ENST00000636378 921 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
HOXC12P31275 AL139254.2-202ENST00000641937 1156 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
HOXC12P31275 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
HOXC12P31275 MROH3P-201ENST00000435735 2676 ntBASIC6.46□□□□□ -1.38
HOXC12P31275 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXC12P31275 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC12P31275 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXC12P31275 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
HOXC12P31275 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms