Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
SMARCA1P28370 AC008627.1-201ENST00000517511 1704 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SMARCA1P28370 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.02□□□□□ -1.29
SMARCA1P28370 RNU6-152P-201ENST00000384037 107 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SMARCA1P28370 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.02□□□□□ -1.29
SMARCA1P28370 AL096711.1-201ENST00000404780 554 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 RPL35AP3-201ENST00000414680 288 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 NME1P1-201ENST00000420914 382 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 AJ239321.1-201ENST00000424255 564 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 AL445528.1-201ENST00000426330 420 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 RPL34P27-201ENST00000428810 349 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.02□□□□□ -1.29
SMARCA1P28370 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SMARCA1P28370 MORF4L1P4-201ENST00000450245 976 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 C1DP3-201ENST00000455013 423 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.02□□□□□ -1.29
SMARCA1P28370 PFN1P8-201ENST00000497012 543 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC7.02□□□□□ -1.29
SMARCA1P28370 PANCR-201ENST00000503456 493 ntTSL 5 BASIC7.02□□□□□ -1.29
SMARCA1P28370 AC008945.1-201ENST00000505144 499 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.02□□□□□ -1.29
SMARCA1P28370 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC7.02□□□□□ -1.29
SMARCA1P28370 SNORA81.2-201ENST00000516868 170 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC7.02□□□□□ -1.29
SMARCA1P28370 TPM3P3-201ENST00000521343 354 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.02□□□□□ -1.29
SMARCA1P28370 AC090115.2-201ENST00000548060 883 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SMARCA1P28370 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.02□□□□□ -1.29
SMARCA1P28370 AC007956.1-201ENST00000555623 542 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.02□□□□□ -1.29
SMARCA1P28370 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC7.02□□□□□ -1.29
SMARCA1P28370 AC005244.1-201ENST00000582566 339 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 AL136131.3-201ENST00000607600 188 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 AC022919.1-201ENST00000624979 626 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.02□□□□□ -1.29
SMARCA1P28370 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.02□□□□□ -1.29
SMARCA1P28370 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.02□□□□□ -1.29
SMARCA1P28370 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.02□□□□□ -1.29
SMARCA1P28370 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SMARCA1P28370 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SMARCA1P28370 CUL4AP1-201ENST00000514750 1863 ntBASIC7.02□□□□□ -1.29
SMARCA1P28370 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SMARCA1P28370 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
SMARCA1P28370 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.02□□□□□ -1.29
SMARCA1P28370 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.02□□□□□ -1.29
SMARCA1P28370 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.02□□□□□ -1.29
SMARCA1P28370 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SMARCA1P28370 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
SMARCA1P28370 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.02□□□□□ -1.29
SMARCA1P28370 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC7.01□□□□□ -1.29
SMARCA1P28370 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.01□□□□□ -1.29
SMARCA1P28370 AP001002.1-201ENST00000625148 1513 ntBASIC7.01□□□□□ -1.29
SMARCA1P28370 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.01□□□□□ -1.29
SMARCA1P28370 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
SMARCA1P28370 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SMARCA1P28370 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
SMARCA1P28370 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
SMARCA1P28370 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SMARCA1P28370 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SMARCA1P28370 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SMARCA1P28370 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.01□□□□□ -1.29
SMARCA1P28370 AC119674.1-202ENST00000641333 1860 ntBASIC7.01□□□□□ -1.29
SMARCA1P28370 AL355377.1-201ENST00000621125 1653 ntBASIC7.01□□□□□ -1.29
SMARCA1P28370 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SMARCA1P28370 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SMARCA1P28370 RNA5SP375-201ENST00000362975 119 ntBASIC7.01□□□□□ -1.29
SMARCA1P28370 RAB5CP1-201ENST00000395972 580 ntBASIC7.01□□□□□ -1.29
SMARCA1P28370 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.01□□□□□ -1.29
SMARCA1P28370 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.01□□□□□ -1.29
SMARCA1P28370 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC7.01□□□□□ -1.29
SMARCA1P28370 AC016027.5-201ENST00000427227 210 ntBASIC7.01□□□□□ -1.29
SMARCA1P28370 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC7.01□□□□□ -1.29
SMARCA1P28370 GAPDHP75-201ENST00000433910 943 ntBASIC7.01□□□□□ -1.29
SMARCA1P28370 VN1R110P-201ENST00000438988 971 ntBASIC7.01□□□□□ -1.29
SMARCA1P28370 ATP5LP2-201ENST00000440646 311 ntBASIC7.01□□□□□ -1.29
SMARCA1P28370 ZNF736P6Y-201ENST00000447526 1213 ntBASIC7.01□□□□□ -1.29
SMARCA1P28370 AL445466.1-201ENST00000448432 357 ntBASIC7.01□□□□□ -1.29
SMARCA1P28370 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC7.01□□□□□ -1.29
SMARCA1P28370 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SMARCA1P28370 AC104629.1-201ENST00000494226 508 ntBASIC7.01□□□□□ -1.29
SMARCA1P28370 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.01□□□□□ -1.29
SMARCA1P28370 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.01□□□□□ -1.29
SMARCA1P28370 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7.01□□□□□ -1.29
SMARCA1P28370 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC7.01□□□□□ -1.29
SMARCA1P28370 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.01□□□□□ -1.29
SMARCA1P28370 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.01□□□□□ -1.29
SMARCA1P28370 AC134349.2-201ENST00000535136 910 ntBASIC7.01□□□□□ -1.29
SMARCA1P28370 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.01□□□□□ -1.29
SMARCA1P28370 AC007494.1-201ENST00000562293 760 ntBASIC7.01□□□□□ -1.29
SMARCA1P28370 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.01□□□□□ -1.29
SMARCA1P28370 AC090330.1-201ENST00000588646 764 ntBASIC7.01□□□□□ -1.29
SMARCA1P28370 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.01□□□□□ -1.29
SMARCA1P28370 AC110792.4-201ENST00000609843 298 ntBASIC7.01□□□□□ -1.29
SMARCA1P28370 MIR6809-201ENST00000612189 116 ntBASIC7.01□□□□□ -1.29
SMARCA1P28370 AL162377.2-201ENST00000624532 337 ntBASIC7.01□□□□□ -1.29
SMARCA1P28370 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms