Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 OR7E22P-201ENST00000478335 1035 ntBASIC5.8□□□□□ -1.48
ABCD3P28288 RPL17P2-201ENST00000491913 451 ntBASIC5.8□□□□□ -1.48
ABCD3P28288 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.8□□□□□ -1.48
ABCD3P28288 RN7SL362P-201ENST00000494228 267 ntBASIC5.8□□□□□ -1.48
ABCD3P28288 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.8□□□□□ -1.48
ABCD3P28288 ZNF519P4-201ENST00000514008 125 ntBASIC5.8□□□□□ -1.48
ABCD3P28288 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.8□□□□□ -1.48
ABCD3P28288 AC103833.1-201ENST00000517442 172 ntBASIC5.8□□□□□ -1.48
ABCD3P28288 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.8□□□□□ -1.48
ABCD3P28288 AP005639.1-201ENST00000526939 192 ntBASIC5.8□□□□□ -1.48
ABCD3P28288 OR4R2P-201ENST00000530815 597 ntBASIC5.8□□□□□ -1.48
ABCD3P28288 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.8□□□□□ -1.48
ABCD3P28288 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.8□□□□□ -1.48
ABCD3P28288 AC233266.2-201ENST00000567067 528 ntBASIC5.8□□□□□ -1.48
ABCD3P28288 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.8□□□□□ -1.48
ABCD3P28288 AC068020.1-201ENST00000594215 661 ntBASIC5.8□□□□□ -1.48
ABCD3P28288 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.8□□□□□ -1.48
ABCD3P28288 AC130352.1-201ENST00000602979 661 ntBASIC5.8□□□□□ -1.48
ABCD3P28288 AC084373.1-201ENST00000603311 235 ntBASIC5.8□□□□□ -1.48
ABCD3P28288 RPSAP75-201ENST00000605848 301 ntBASIC5.8□□□□□ -1.48
ABCD3P28288 AL135999.3-201ENST00000610501 812 ntBASIC5.8□□□□□ -1.48
ABCD3P28288 AP001885.1-201ENST00000621658 558 ntBASIC5.8□□□□□ -1.48
ABCD3P28288 RPL23AP61-201ENST00000623642 466 ntBASIC5.8□□□□□ -1.48
ABCD3P28288 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
ABCD3P28288 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
ABCD3P28288 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.8□□□□□ -1.48
ABCD3P28288 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.8□□□□□ -1.48
ABCD3P28288 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ABCD3P28288 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
ABCD3P28288 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ABCD3P28288 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ABCD3P28288 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ABCD3P28288 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
ABCD3P28288 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ABCD3P28288 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ABCD3P28288 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ABCD3P28288 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
ABCD3P28288 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ABCD3P28288 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.79□□□□□ -1.48
ABCD3P28288 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ABCD3P28288 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.79□□□□□ -1.48
ABCD3P28288 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
ABCD3P28288 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.79□□□□□ -1.48
ABCD3P28288 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.79□□□□□ -1.48
ABCD3P28288 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
ABCD3P28288 AC011815.2-201ENST00000618230 2021 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ABCD3P28288 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.79□□□□□ -1.48
ABCD3P28288 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ABCD3P28288 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.79□□□□□ -1.48
ABCD3P28288 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ABCD3P28288 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.79□□□□□ -1.48
ABCD3P28288 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ABCD3P28288 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ABCD3P28288 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
ABCD3P28288 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.79□□□□□ -1.48
ABCD3P28288 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
ABCD3P28288 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.79□□□□□ -1.48
ABCD3P28288 AC006065.1-201ENST00000422539 802 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.79□□□□□ -1.48
ABCD3P28288 AP000949.1-201ENST00000438328 629 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ABCD3P28288 AL355355.1-201ENST00000442900 793 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 TIMM8BP2-201ENST00000445940 251 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.79□□□□□ -1.48
ABCD3P28288 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.79□□□□□ -1.48
ABCD3P28288 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.79□□□□□ -1.48
ABCD3P28288 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.79□□□□□ -1.48
ABCD3P28288 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.79□□□□□ -1.48
ABCD3P28288 SNX18P25-201ENST00000510539 758 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 AC027338.1-201ENST00000514840 825 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 RNA5SP441-201ENST00000516809 88 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 MTCYBP19-201ENST00000517463 1124 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.79□□□□□ -1.48
ABCD3P28288 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.79□□□□□ -1.48
ABCD3P28288 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.79□□□□□ -1.48
ABCD3P28288 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
ABCD3P28288 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.79□□□□□ -1.48
ABCD3P28288 NPIPB14P-203ENST00000532298 987 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.79□□□□□ -1.48
ABCD3P28288 NOP56P3-201ENST00000549457 385 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.79□□□□□ -1.48
ABCD3P28288 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.79□□□□□ -1.48
ABCD3P28288 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
ABCD3P28288 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.79□□□□□ -1.48
ABCD3P28288 LINC00556-201ENST00000569603 412 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.79□□□□□ -1.48
ABCD3P28288 AC135178.6-201ENST00000605314 398 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 AC009779.8-202ENST00000607990 932 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 AL359091.2-201ENST00000609303 556 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 MIR6780B-201ENST00000610307 79 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 AC006924.1-201ENST00000610750 559 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 AL133445.2-201ENST00000611191 527 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 AL645927.2-201ENST00000618350 349 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 FO681491.1-202ENST00000623392 737 ntBASIC5.79□□□□□ -1.48
ABCD3P28288 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.79□□□□□ -1.48
ABCD3P28288 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.79□□□□□ -1.48
ABCD3P28288 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
ABCD3P28288 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms