Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 RNU6-249P-201ENST00000363016 102 ntBASIC5.04□□□□□ -1.6
HLA-DMAP28067 RNA5SP346-201ENST00000363541 121 ntBASIC5.04□□□□□ -1.6
HLA-DMAP28067 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 AL353133.1-201ENST00000407695 401 ntBASIC5.04□□□□□ -1.6
HLA-DMAP28067 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DMAP28067 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DMAP28067 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 AC096775.1-201ENST00000437724 448 ntBASIC5.04□□□□□ -1.6
HLA-DMAP28067 AC019185.3-201ENST00000438805 323 ntBASIC5.04□□□□□ -1.6
HLA-DMAP28067 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DMAP28067 SDC4P-201ENST00000453285 601 ntBASIC5.04□□□□□ -1.6
HLA-DMAP28067 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 SNORD125-201ENST00000459538 96 ntBASIC5.04□□□□□ -1.6
HLA-DMAP28067 AL603882.1-201ENST00000463059 681 ntBASIC5.04□□□□□ -1.6
HLA-DMAP28067 GM2AP2-201ENST00000491764 562 ntBASIC5.04□□□□□ -1.6
HLA-DMAP28067 AL049874.2-201ENST00000492636 288 ntBASIC5.04□□□□□ -1.6
HLA-DMAP28067 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 AC008868.1-201ENST00000509786 737 ntBASIC5.04□□□□□ -1.6
HLA-DMAP28067 AC093816.1-201ENST00000515076 913 ntBASIC5.04□□□□□ -1.6
HLA-DMAP28067 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DMAP28067 HIRAP1-201ENST00000605318 787 ntBASIC5.04□□□□□ -1.6
HLA-DMAP28067 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DMAP28067 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 AC144833.1-201ENST00000567953 4089 ntBASIC5.04□□□□□ -1.6
HLA-DMAP28067 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DMAP28067 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DMAP28067 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DMAP28067 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DMAP28067 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DMAP28067 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DMAP28067 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DMAP28067 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 AL162456.1-201ENST00000634535 2006 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 AC026310.1-201ENST00000396004 378 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DMAP28067 RN7SKP205-201ENST00000410999 307 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 DHFRP2-201ENST00000414224 547 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 RPL21P50-201ENST00000417698 477 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DMAP28067 RPS15AP30-201ENST00000420976 390 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 AC002127.1-201ENST00000421305 225 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 AL645939.3-201ENST00000435408 225 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 OR52E3P-201ENST00000452083 936 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 TPT1P1-201ENST00000458495 518 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 RNU7-157P-201ENST00000459600 66 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 PFN1P6-201ENST00000476786 399 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 RPS10P28-201ENST00000480396 498 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 AC098976.1-201ENST00000513014 541 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 AC103855.4-201ENST00000533158 265 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DMAP28067 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 AF186192.2-204ENST00000581667 524 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 AC006272.2-201ENST00000594725 163 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 AL451049.1-201ENST00000608672 497 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 AL139124.1-201ENST00000609123 421 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DMAP28067 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
HLA-DMAP28067 AC006453.3-201ENST00000635891 377 ntBASIC5.03□□□□□ -1.6
HLA-DMAP28067 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DMAP28067 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms