Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.95□□□□□ -1.62
COL8A2P25067 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.95□□□□□ -1.62
COL8A2P25067 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.95□□□□□ -1.62
COL8A2P25067 RN7SKP288-201ENST00000516227 268 ntBASIC4.95□□□□□ -1.62
COL8A2P25067 CYCSP22-201ENST00000517555 339 ntBASIC4.95□□□□□ -1.62
COL8A2P25067 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.95□□□□□ -1.62
COL8A2P25067 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.95□□□□□ -1.62
COL8A2P25067 AC091078.2-201ENST00000557145 559 ntBASIC4.95□□□□□ -1.62
COL8A2P25067 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC4.95□□□□□ -1.62
COL8A2P25067 AC233699.1-201ENST00000569955 1168 ntBASIC4.95□□□□□ -1.62
COL8A2P25067 TXNP4-201ENST00000575018 310 ntBASIC4.95□□□□□ -1.62
COL8A2P25067 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC4.95□□□□□ -1.62
COL8A2P25067 AP001496.3-201ENST00000580230 913 ntBASIC4.95□□□□□ -1.62
COL8A2P25067 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.95□□□□□ -1.62
COL8A2P25067 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.95□□□□□ -1.62
COL8A2P25067 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
COL8A2P25067 AL352984.2-202ENST00000613699 155 ntBASIC4.95□□□□□ -1.62
COL8A2P25067 AL138960.1-201ENST00000613838 513 ntBASIC4.95□□□□□ -1.62
COL8A2P25067 AL139099.4-201ENST00000614802 114 ntBASIC4.95□□□□□ -1.62
COL8A2P25067 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL8A2P25067 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.95□□□□□ -1.62
COL8A2P25067 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.95□□□□□ -1.62
COL8A2P25067 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.95□□□□□ -1.62
COL8A2P25067 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
COL8A2P25067 AC063952.1-203ENST00000634410 658 ntBASIC4.95□□□□□ -1.62
COL8A2P25067 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.95□□□□□ -1.62
COL8A2P25067 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
COL8A2P25067 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.95□□□□□ -1.62
COL8A2P25067 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL8A2P25067 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
COL8A2P25067 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC4.95□□□□□ -1.62
COL8A2P25067 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
COL8A2P25067 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL8A2P25067 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC4.95□□□□□ -1.62
COL8A2P25067 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL8A2P25067 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.95□□□□□ -1.62
COL8A2P25067 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL8A2P25067 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
COL8A2P25067 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL8A2P25067 SAMMSON-210ENST00000641260 1308 ntBASIC4.95□□□□□ -1.62
COL8A2P25067 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL8A2P25067 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.95□□□□□ -1.62
COL8A2P25067 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.95□□□□□ -1.62
COL8A2P25067 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL8A2P25067 ZNF101P1-201ENST00000435701 1720 ntBASIC4.94□□□□□ -1.62
COL8A2P25067 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL8A2P25067 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.94□□□□□ -1.62
COL8A2P25067 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC4.94□□□□□ -1.62
COL8A2P25067 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL8A2P25067 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL8A2P25067 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL8A2P25067 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
COL8A2P25067 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL8A2P25067 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
COL8A2P25067 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC4.94□□□□□ -1.62
COL8A2P25067 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL8A2P25067 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COL8A2P25067 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL8A2P25067 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC4.94□□□□□ -1.62
COL8A2P25067 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
COL8A2P25067 MIR323A-201ENST00000362199 86 ntBASIC4.94□□□□□ -1.62
COL8A2P25067 RNA5SP242-201ENST00000364171 118 ntBASIC4.94□□□□□ -1.62
COL8A2P25067 RNA5SP211-201ENST00000365516 117 ntBASIC4.94□□□□□ -1.62
COL8A2P25067 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
COL8A2P25067 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.94□□□□□ -1.62
COL8A2P25067 AC016027.5-201ENST00000427227 210 ntBASIC4.94□□□□□ -1.62
COL8A2P25067 DEFA9P-201ENST00000433042 285 ntBASIC4.94□□□□□ -1.62
COL8A2P25067 RN7SL717P-201ENST00000478343 297 ntBASIC4.94□□□□□ -1.62
COL8A2P25067 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC4.94□□□□□ -1.62
COL8A2P25067 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.94□□□□□ -1.62
COL8A2P25067 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC4.94□□□□□ -1.62
COL8A2P25067 HMGN2P36-201ENST00000529541 409 ntBASIC4.94□□□□□ -1.62
COL8A2P25067 OR4A42P-201ENST00000531397 938 ntBASIC4.94□□□□□ -1.62
COL8A2P25067 LDHC-205ENST00000537486 583 ntTSL 5 BASIC4.94□□□□□ -1.62
COL8A2P25067 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.94□□□□□ -1.62
COL8A2P25067 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.94□□□□□ -1.62
COL8A2P25067 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC4.94□□□□□ -1.62
COL8A2P25067 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.94□□□□□ -1.62
COL8A2P25067 AC020978.7-201ENST00000575953 1187 ntBASIC4.94□□□□□ -1.62
COL8A2P25067 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.94□□□□□ -1.62
COL8A2P25067 SNORD95-201ENST00000579879 68 ntBASIC4.94□□□□□ -1.62
COL8A2P25067 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.94□□□□□ -1.62
COL8A2P25067 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.94□□□□□ -1.62
COL8A2P25067 AC015802.2-201ENST00000589690 189 ntBASIC4.94□□□□□ -1.62
COL8A2P25067 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.94□□□□□ -1.62
COL8A2P25067 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC4.94□□□□□ -1.62
COL8A2P25067 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL8A2P25067 OR13C1P-202ENST00000641378 2919 ntBASIC4.94□□□□□ -1.62
COL8A2P25067 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL8A2P25067 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL8A2P25067 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
COL8A2P25067 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC4.94□□□□□ -1.62
COL8A2P25067 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC4.94□□□□□ -1.62
COL8A2P25067 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC4.94□□□□□ -1.62
COL8A2P25067 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
COL8A2P25067 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL8A2P25067 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL8A2P25067 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
COL8A2P25067 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL8A2P25067 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms