Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CD28P10747 PARP4P2-201ENST00000446672 3326 ntBASIC4.66□□□□□ -1.66
CD28P10747 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CD28P10747 AC007159.1-201ENST00000566529 4706 ntBASIC4.66□□□□□ -1.66
CD28P10747 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC4.66□□□□□ -1.66
CD28P10747 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CD28P10747 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC4.66□□□□□ -1.66
CD28P10747 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CD28P10747 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC4.66□□□□□ -1.66
CD28P10747 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CD28P10747 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CD28P10747 AP000547.3-204ENST00000588548 2523 ntBASIC4.66□□□□□ -1.66
CD28P10747 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CD28P10747 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
CD28P10747 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CD28P10747 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CD28P10747 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CD28P10747 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CD28P10747 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CD28P10747 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC4.65□□□□□ -1.66
CD28P10747 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
CD28P10747 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CD28P10747 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.65□□□□□ -1.66
CD28P10747 RARSP1-201ENST00000542842 1418 ntBASIC4.65□□□□□ -1.66
CD28P10747 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC4.65□□□□□ -1.66
CD28P10747 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CD28P10747 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CD28P10747 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CD28P10747 MIR375-201ENST00000362103 64 ntBASIC4.65□□□□□ -1.67
CD28P10747 CAV1-204ENST00000393470 598 ntTSL 4 BASIC4.65□□□□□ -1.67
CD28P10747 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC4.65□□□□□ -1.67
CD28P10747 SNORA11B-201ENST00000408175 129 ntBASIC4.65□□□□□ -1.67
CD28P10747 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC4.65□□□□□ -1.67
CD28P10747 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.65□□□□□ -1.67
CD28P10747 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.65□□□□□ -1.67
CD28P10747 SUMO2P3-201ENST00000438311 288 ntBASIC4.65□□□□□ -1.67
CD28P10747 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.65□□□□□ -1.67
CD28P10747 AC002075.1-201ENST00000457396 676 ntBASIC4.65□□□□□ -1.67
CD28P10747 RPSAP39-201ENST00000467439 883 ntBASIC4.65□□□□□ -1.67
CD28P10747 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC4.65□□□□□ -1.67
CD28P10747 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.65□□□□□ -1.67
CD28P10747 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.65□□□□□ -1.67
CD28P10747 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.65□□□□□ -1.67
CD28P10747 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.65□□□□□ -1.67
CD28P10747 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC4.65□□□□□ -1.67
CD28P10747 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CD28P10747 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC4.65□□□□□ -1.67
CD28P10747 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.65□□□□□ -1.67
CD28P10747 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.65□□□□□ -1.67
CD28P10747 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.65□□□□□ -1.67
CD28P10747 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CD28P10747 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.65□□□□□ -1.67
CD28P10747 MIR193BHG-214ENST00000641765 509 ntBASIC4.65□□□□□ -1.67
CD28P10747 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CD28P10747 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC4.65□□□□□ -1.67
CD28P10747 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CD28P10747 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CD28P10747 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.65□□□□□ -1.67
CD28P10747 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.65□□□□□ -1.67
CD28P10747 POT1-202ENST00000393329 3950 ntTSL 5 BASIC4.65□□□□□ -1.67
CD28P10747 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CD28P10747 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CD28P10747 AC130360.2-201ENST00000533477 1556 ntBASIC4.65□□□□□ -1.67
CD28P10747 PDZK1P1-202ENST00000425209 1350 ntBASIC4.65□□□□□ -1.67
CD28P10747 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CD28P10747 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC4.64□□□□□ -1.67
CD28P10747 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
CD28P10747 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.64□□□□□ -1.67
CD28P10747 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
CD28P10747 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC4.64□□□□□ -1.67
CD28P10747 HSPD1P8-201ENST00000400121 1658 ntBASIC4.64□□□□□ -1.67
CD28P10747 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CD28P10747 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC4.64□□□□□ -1.67
CD28P10747 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CD28P10747 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.64□□□□□ -1.67
CD28P10747 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CD28P10747 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CD28P10747 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CD28P10747 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC4.64□□□□□ -1.67
CD28P10747 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CD28P10747 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CD28P10747 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CD28P10747 U3.25-201ENST00000391209 220 ntBASIC4.64□□□□□ -1.67
CD28P10747 SDHDP6-201ENST00000414693 480 ntBASIC4.64□□□□□ -1.67
CD28P10747 KIF4CP-201ENST00000422742 1279 ntBASIC4.64□□□□□ -1.67
CD28P10747 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.64□□□□□ -1.67
CD28P10747 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.64□□□□□ -1.67
CD28P10747 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.64□□□□□ -1.67
CD28P10747 AP000281.1-201ENST00000444036 316 ntBASIC4.64□□□□□ -1.67
CD28P10747 RAB28P2-201ENST00000454299 641 ntBASIC4.64□□□□□ -1.67
CD28P10747 AC103563.5-201ENST00000455643 364 ntBASIC4.64□□□□□ -1.67
CD28P10747 AC112187.1-201ENST00000455837 479 ntBASIC4.64□□□□□ -1.67
CD28P10747 AC110749.1-201ENST00000462007 357 ntBASIC4.64□□□□□ -1.67
CD28P10747 RN7SL352P-201ENST00000466002 277 ntBASIC4.64□□□□□ -1.67
CD28P10747 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.64□□□□□ -1.67
CD28P10747 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CD28P10747 AL136038.1-201ENST00000497246 351 ntBASIC4.64□□□□□ -1.67
CD28P10747 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CD28P10747 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
CD28P10747 AC109481.1-201ENST00000509173 282 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms