Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.54□□□□□ -1.36
MMP3P08254 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.54□□□□□ -1.36
MMP3P08254 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.54□□□□□ -1.36
MMP3P08254 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.54□□□□□ -1.36
MMP3P08254 AC097523.2-201ENST00000435551 652 ntBASIC6.54□□□□□ -1.36
MMP3P08254 RN7SL72P-201ENST00000460697 269 ntBASIC6.54□□□□□ -1.36
MMP3P08254 AC026348.1-201ENST00000462549 1053 ntBASIC6.54□□□□□ -1.36
MMP3P08254 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.54□□□□□ -1.36
MMP3P08254 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
MMP3P08254 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.54□□□□□ -1.36
MMP3P08254 SCARNA6.1-201ENST00000516989 238 ntBASIC6.54□□□□□ -1.36
MMP3P08254 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.54□□□□□ -1.36
MMP3P08254 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
MMP3P08254 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.54□□□□□ -1.36
MMP3P08254 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.54□□□□□ -1.36
MMP3P08254 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.54□□□□□ -1.36
MMP3P08254 AC079395.2-201ENST00000610982 737 ntBASIC6.54□□□□□ -1.36
MMP3P08254 AC107905.1-201ENST00000616204 426 ntBASIC6.54□□□□□ -1.36
MMP3P08254 AL353684.1-201ENST00000622677 1120 ntBASIC6.54□□□□□ -1.36
MMP3P08254 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.54□□□□□ -1.36
MMP3P08254 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.54□□□□□ -1.36
MMP3P08254 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.54□□□□□ -1.36
MMP3P08254 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MMP3P08254 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.54□□□□□ -1.36
MMP3P08254 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
MMP3P08254 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MMP3P08254 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MMP3P08254 PABPC1P8-201ENST00000452851 2086 ntBASIC6.54□□□□□ -1.36
MMP3P08254 AC007114.2-201ENST00000576014 4281 ntBASIC6.54□□□□□ -1.36
MMP3P08254 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
MMP3P08254 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MMP3P08254 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MMP3P08254 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.54□□□□□ -1.36
MMP3P08254 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
MMP3P08254 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
MMP3P08254 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
MMP3P08254 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
MMP3P08254 THAP12P9-201ENST00000503971 2360 ntBASIC6.53□□□□□ -1.36
MMP3P08254 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MMP3P08254 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.53□□□□□ -1.36
MMP3P08254 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.53□□□□□ -1.36
MMP3P08254 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.53□□□□□ -1.36
MMP3P08254 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
MMP3P08254 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MMP3P08254 RN7SKP151-201ENST00000410230 316 ntBASIC6.53□□□□□ -1.36
MMP3P08254 CASKP1-201ENST00000412870 582 ntBASIC6.53□□□□□ -1.36
MMP3P08254 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.53□□□□□ -1.36
MMP3P08254 OR6E1P-201ENST00000414424 923 ntBASIC6.53□□□□□ -1.36
MMP3P08254 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.53□□□□□ -1.36
MMP3P08254 FCF1P7-201ENST00000451185 558 ntBASIC6.53□□□□□ -1.36
MMP3P08254 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.53□□□□□ -1.36
MMP3P08254 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.53□□□□□ -1.36
MMP3P08254 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.53□□□□□ -1.36
MMP3P08254 AC027026.1-201ENST00000532323 742 ntBASIC6.53□□□□□ -1.36
MMP3P08254 AL049872.1-201ENST00000556323 322 ntBASIC6.53□□□□□ -1.36
MMP3P08254 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MMP3P08254 MIR1273E-201ENST00000581165 102 ntBASIC6.53□□□□□ -1.36
MMP3P08254 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.53□□□□□ -1.36
MMP3P08254 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.53□□□□□ -1.36
MMP3P08254 AC100814.1-201ENST00000606963 623 ntBASIC6.53□□□□□ -1.36
MMP3P08254 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.53□□□□□ -1.36
MMP3P08254 SDR42E1P1-201ENST00000611327 477 ntBASIC6.53□□□□□ -1.36
MMP3P08254 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MMP3P08254 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
MMP3P08254 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
MMP3P08254 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
MMP3P08254 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MMP3P08254 MIPEPP2-201ENST00000422560 1819 ntBASIC6.53□□□□□ -1.36
MMP3P08254 AL033543.1-201ENST00000623440 13454 ntBASIC6.52□□□□□ -1.36
MMP3P08254 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.52□□□□□ -1.36
MMP3P08254 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.52□□□□□ -1.37
MMP3P08254 AL031651.1-201ENST00000615357 1438 ntBASIC6.52□□□□□ -1.37
MMP3P08254 AC123769.1-201ENST00000530992 3192 ntBASIC6.52□□□□□ -1.37
MMP3P08254 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MMP3P08254 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MMP3P08254 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
MMP3P08254 AL353763.1-201ENST00000624467 1628 ntBASIC6.52□□□□□ -1.37
MMP3P08254 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
MMP3P08254 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
MMP3P08254 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
MMP3P08254 RN7SKP162-201ENST00000363605 345 ntBASIC6.52□□□□□ -1.37
MMP3P08254 RN7SKP124-201ENST00000364730 341 ntBASIC6.52□□□□□ -1.37
MMP3P08254 AC008171.1-201ENST00000395058 200 ntBASIC6.52□□□□□ -1.37
MMP3P08254 OR2W4P-201ENST00000406496 926 ntBASIC6.52□□□□□ -1.37
MMP3P08254 AL357752.1-201ENST00000412817 349 ntBASIC6.52□□□□□ -1.37
MMP3P08254 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.52□□□□□ -1.37
MMP3P08254 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.52□□□□□ -1.37
MMP3P08254 TNPO1P1-201ENST00000423641 1138 ntBASIC6.52□□□□□ -1.37
MMP3P08254 FMO7P-201ENST00000436045 768 ntBASIC6.52□□□□□ -1.37
MMP3P08254 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.52□□□□□ -1.37
MMP3P08254 AC023141.8-201ENST00000442554 208 ntBASIC6.52□□□□□ -1.37
MMP3P08254 AC005297.1-201ENST00000444765 862 ntBASIC6.52□□□□□ -1.37
MMP3P08254 AC017099.1-201ENST00000448261 1028 ntBASIC6.52□□□□□ -1.37
MMP3P08254 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.52□□□□□ -1.37
MMP3P08254 FRG2FP-204ENST00000453982 852 ntBASIC6.52□□□□□ -1.37
MMP3P08254 RPL7L1P3-201ENST00000455249 689 ntBASIC6.52□□□□□ -1.37
MMP3P08254 SIAH1P1-201ENST00000479411 923 ntBASIC6.52□□□□□ -1.37
MMP3P08254 AC009120.1-201ENST00000493458 473 ntBASIC6.52□□□□□ -1.37
MMP3P08254 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.52□□□□□ -1.37
MMP3P08254 CYP4F27P-201ENST00000514557 494 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms