Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.51□□□□□ -1.37
TPM3P06753 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM3P06753 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM3P06753 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.51□□□□□ -1.37
TPM3P06753 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.51□□□□□ -1.37
TPM3P06753 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM3P06753 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM3P06753 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TPM3P06753 AC026523.2-201ENST00000625039 7739 ntBASIC6.51□□□□□ -1.37
TPM3P06753 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.51□□□□□ -1.37
TPM3P06753 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM3P06753 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.51□□□□□ -1.37
TPM3P06753 RPS14P4-201ENST00000415880 418 ntBASIC6.51□□□□□ -1.37
TPM3P06753 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.51□□□□□ -1.37
TPM3P06753 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.51□□□□□ -1.37
TPM3P06753 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.51□□□□□ -1.37
TPM3P06753 AC097359.1-201ENST00000447946 463 ntBASIC6.51□□□□□ -1.37
TPM3P06753 AL034369.1-201ENST00000453808 477 ntBASIC6.51□□□□□ -1.37
TPM3P06753 AP003385.3-201ENST00000472498 287 ntBASIC6.51□□□□□ -1.37
TPM3P06753 AC006539.1-201ENST00000481419 501 ntBASIC6.51□□□□□ -1.37
TPM3P06753 RPL38P3-201ENST00000484463 213 ntBASIC6.51□□□□□ -1.37
TPM3P06753 OR4A17P-201ENST00000526032 904 ntBASIC6.51□□□□□ -1.37
TPM3P06753 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.51□□□□□ -1.37
TPM3P06753 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.51□□□□□ -1.37
TPM3P06753 AC008507.3-201ENST00000585753 472 ntBASIC6.51□□□□□ -1.37
TPM3P06753 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.51□□□□□ -1.37
TPM3P06753 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.51□□□□□ -1.37
TPM3P06753 AL049829.3-202ENST00000604278 711 ntBASIC6.51□□□□□ -1.37
TPM3P06753 AL645933.2-201ENST00000606743 1207 ntBASIC6.51□□□□□ -1.37
TPM3P06753 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.51□□□□□ -1.37
TPM3P06753 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.51□□□□□ -1.37
TPM3P06753 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM3P06753 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.51□□□□□ -1.37
TPM3P06753 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TPM3P06753 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.51□□□□□ -1.37
TPM3P06753 AC217777.1-201ENST00000570034 1471 ntBASIC6.51□□□□□ -1.37
TPM3P06753 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM3P06753 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TPM3P06753 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
TPM3P06753 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
TPM3P06753 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
TPM3P06753 EIF3EP1-201ENST00000433978 1316 ntBASIC6.5□□□□□ -1.37
TPM3P06753 AC083899.1-201ENST00000454465 3819 ntBASIC6.5□□□□□ -1.37
TPM3P06753 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TPM3P06753 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
TPM3P06753 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
TPM3P06753 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.5□□□□□ -1.37
TPM3P06753 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
TPM3P06753 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TPM3P06753 RNA5SP85-201ENST00000365378 119 ntBASIC6.5□□□□□ -1.37
TPM3P06753 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.5□□□□□ -1.37
TPM3P06753 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.5□□□□□ -1.37
TPM3P06753 RPL6P21-201ENST00000418672 846 ntBASIC6.5□□□□□ -1.37
TPM3P06753 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.5□□□□□ -1.37
TPM3P06753 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.5□□□□□ -1.37
TPM3P06753 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TPM3P06753 SEPT14P12-201ENST00000442280 560 ntBASIC6.5□□□□□ -1.37
TPM3P06753 TRIM60P16-201ENST00000444048 694 ntBASIC6.5□□□□□ -1.37
TPM3P06753 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.5□□□□□ -1.37
TPM3P06753 AL445991.1-201ENST00000450381 475 ntBASIC6.5□□□□□ -1.37
TPM3P06753 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.5□□□□□ -1.37
TPM3P06753 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC6.5□□□□□ -1.37
TPM3P06753 AC095052.1-201ENST00000509955 863 ntBASIC6.5□□□□□ -1.37
TPM3P06753 MIR2117-201ENST00000516780 80 ntBASIC6.5□□□□□ -1.37
TPM3P06753 SEPT10P1-201ENST00000517342 1162 ntBASIC6.5□□□□□ -1.37
TPM3P06753 OR7E158P-201ENST00000524483 910 ntBASIC6.5□□□□□ -1.37
TPM3P06753 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.5□□□□□ -1.37
TPM3P06753 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.5□□□□□ -1.37
TPM3P06753 MIR7853-201ENST00000584820 132 ntBASIC6.5□□□□□ -1.37
TPM3P06753 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TPM3P06753 AL512430.4-201ENST00000603085 613 ntBASIC6.5□□□□□ -1.37
TPM3P06753 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TPM3P06753 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.5□□□□□ -1.37
TPM3P06753 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.5□□□□□ -1.37
TPM3P06753 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TPM3P06753 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TPM3P06753 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TPM3P06753 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
TPM3P06753 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.49□□□□□ -1.37
TPM3P06753 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.49□□□□□ -1.37
TPM3P06753 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
TPM3P06753 AC003985.2-201ENST00000562268 1669 ntBASIC6.49□□□□□ -1.37
TPM3P06753 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TPM3P06753 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.49□□□□□ -1.37
TPM3P06753 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TPM3P06753 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.49□□□□□ -1.37
TPM3P06753 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TPM3P06753 RBMY1HP-201ENST00000382759 1389 ntBASIC6.49□□□□□ -1.37
TPM3P06753 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.49□□□□□ -1.37
TPM3P06753 RPL11P4-201ENST00000332269 436 ntBASIC6.49□□□□□ -1.37
TPM3P06753 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TPM3P06753 MIR138-2-201ENST00000384916 84 ntBASIC6.49□□□□□ -1.37
TPM3P06753 AL139805.1-201ENST00000407837 289 ntBASIC6.49□□□□□ -1.37
TPM3P06753 AC096921.1-201ENST00000411661 375 ntBASIC6.49□□□□□ -1.37
TPM3P06753 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.49□□□□□ -1.37
TPM3P06753 PSMD10P2-201ENST00000432890 672 ntBASIC6.49□□□□□ -1.37
TPM3P06753 FTLP19-201ENST00000433300 394 ntBASIC6.49□□□□□ -1.37
TPM3P06753 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TPM3P06753 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.49□□□□□ -1.37
TPM3P06753 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms