Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 RNA5SP478-201ENST00000364657 115 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 RN7SKP269-201ENST00000365545 319 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 SNORA51.9-201ENST00000384295 124 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 RNA5SP156-201ENST00000410250 110 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 RN7SKP121-201ENST00000410842 305 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AC130360.1-201ENST00000425489 1117 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 PPIAP27-201ENST00000453800 265 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 NPM1P27-201ENST00000502784 830 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 IGKV2-4-201ENST00000523070 340 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AC130365.2-201ENST00000525882 1201 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 TRIM51DP-201ENST00000529746 596 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AC079905.1-201ENST00000549280 475 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AC009120.3-201ENST00000563335 499 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 MIR5095-201ENST00000578844 88 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AC006116.5-201ENST00000591936 559 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AC034236.3-201ENST00000605999 461 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AC120053.1-201ENST00000607706 736 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AL008723.3-201ENST00000608926 449 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AC129778.1-202ENST00000623812 261 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AL591379.1-207ENST00000635982 261 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AL513548.1-201ENST00000562904 1724 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 EIF3EP1-201ENST00000433978 1316 ntBASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
CTDP1Q9Y5B0 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AC023490.2-201ENST00000359859 470 ntBASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 RNA5SP435-201ENST00000364044 108 ntBASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 MIR640-201ENST00000385086 96 ntBASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AC007064.3-201ENST00000422608 359 ntBASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 PPIAP10-201ENST00000438675 458 ntBASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AC092106.1-201ENST00000444291 373 ntBASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 RN7SL221P-201ENST00000466190 281 ntBASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AC068587.2-201ENST00000478386 781 ntBASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 LSM3P4-201ENST00000502948 309 ntBASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AP001372.4-201ENST00000524889 472 ntBASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AP003396.4-201ENST00000527574 265 ntBASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 MTND1P24-201ENST00000552175 861 ntBASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AC006116.7-201ENST00000590141 756 ntBASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AC139493.1-201ENST00000604368 397 ntBASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AC097065.2-201ENST00000608159 533 ntBASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 AC006946.3-201ENST00000609791 756 ntBASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CTDP1Q9Y5B0 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms