Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 AP001437.1-201ENST00000608783 456 ntBASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 MIR7109-201ENST00000613748 65 ntBASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 AL357562.1-201ENST00000624911 609 ntBASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 AC073488.3-201ENST00000631611 778 ntBASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 AC002525.1-201ENST00000624392 1622 ntBASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRAPPC4Q9Y296 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 GNL2P1-201ENST00000451274 2190 ntBASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 SNORA77.2-201ENST00000408571 112 ntBASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 AC099535.1-201ENST00000408928 371 ntBASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 PNKDP1-201ENST00000435914 430 ntBASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 AC023141.3-201ENST00000436698 278 ntBASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 AL353662.1-201ENST00000439099 327 ntBASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 CUBNP2-201ENST00000443534 1139 ntBASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 AL162739.1-201ENST00000450606 307 ntBASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 AC019084.1-201ENST00000457337 432 ntBASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 PDCL3P4-201ENST00000489621 720 ntBASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 OR5D2P-201ENST00000524390 911 ntBASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 AC110056.1-201ENST00000525759 911 ntBASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 AC002310.3-201ENST00000569728 723 ntBASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 AC010503.3-201ENST00000594355 540 ntBASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 AC092266.1-201ENST00000610958 165 ntBASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 AC015712.7-201ENST00000615211 635 ntBASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 AC137056.2-201ENST00000624055 1958 ntBASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 THAP12P9-201ENST00000503971 2360 ntBASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRAPPC4Q9Y296 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 RBPJP7-201ENST00000442803 1447 ntBASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 RBPJP5-201ENST00000449433 1447 ntBASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 AC093225.1-201ENST00000506867 1408 ntBASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 AL591135.1-201ENST00000401578 5914 ntBASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 RNU1-65P-201ENST00000363919 148 ntBASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 SNORA51.9-201ENST00000384295 124 ntBASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 AL663074.2-201ENST00000440621 479 ntBASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 UBE2V2P4-201ENST00000447495 259 ntBASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 CTSLP6-201ENST00000458273 1002 ntBASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 RN7SL168P-201ENST00000463821 279 ntBASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 RN7SL197P-201ENST00000466981 299 ntBASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 AC024405.1-201ENST00000532521 1042 ntBASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 MIR4660-201ENST00000583549 74 ntBASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 AC006115.2-201ENST00000596823 202 ntBASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 AC068768.2-201ENST00000602352 343 ntBASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 MIR6780B-201ENST00000610307 79 ntBASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 AC022400.9-201ENST00000623633 273 ntBASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRAPPC4Q9Y296 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms