Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 RNU6-874P-201ENST00000362390 105 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 RNU6-769P-201ENST00000384407 104 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 MIR431-201ENST00000385266 114 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 MT-TS1-201ENST00000387416 69 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 TMSB4XP8-201ENST00000402089 135 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 TMSB4XP6-201ENST00000415187 135 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 SLC35E1P1-201ENST00000419313 864 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 TMSB4XP1-201ENST00000424567 135 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 AL161638.2-201ENST00000427319 507 ntTSL 3 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 S100A13-204ENST00000440685 686 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 AC007383.1-201ENST00000445875 636 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 RPL21P23-201ENST00000446654 460 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 MEMO1P3-201ENST00000459811 302 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 AC018638.4-201ENST00000465971 1150 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 AC009022.1-201ENST00000472115 496 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 AC106872.2-201ENST00000494303 480 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 RN7SL869P-201ENST00000497032 300 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 LINC02517-201ENST00000509453 492 ntTSL 2 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 RNA5SP135-201ENST00000517019 125 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 AC073878.1-201ENST00000567503 474 ntTSL 3 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 ZNF415-209ENST00000595813 580 ntTSL 4 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 PLS3-AS1-201ENST00000606397 521 ntTSL 4 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 AL080285.2-201ENST00000612765 458 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 AL096712.1-201ENST00000614561 159 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 AC243312.2-201ENST00000623340 601 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 NRXN1-212ENST00000412315 2215 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 CEP70-210ENST00000481834 2037 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 IL2RB-201ENST00000216223 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 SOX5-210ENST00000537393 2769 ntTSL 5 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 AL132655.3-201ENST00000603095 1619 ntTSL 2 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 ZNF2-202ENST00000611463 3737 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 PRAMEF30P-201ENST00000438176 1417 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 AC136428.3-201ENST00000566387 1990 ntBASIC8.35□□□□□ -1.07
LHX6Q9UPM6 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 PRSS54-202ENST00000543437 1555 ntTSL 2 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
LHX6Q9UPM6 AL359091.1-201ENST00000449048 1734 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 RNASEH2B-AS1-209ENST00000631080 1707 ntTSL 5 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 SAMMSON-213ENST00000641336 1521 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 RSPH4A-203ENST00000368581 2704 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 DDX18P6-201ENST00000450119 1997 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 ZNF780A-201ENST00000340963 3674 ntAPPRIS P3 TSL 2 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 RNU6-774P-201ENST00000363238 107 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 Y_RNA.180-201ENST00000363867 113 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 SNORD50B-201ENST00000364995 70 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 IGLC6-201ENST00000410078 317 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 METTL15P3-201ENST00000415522 1221 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 COX6CP17-201ENST00000421389 185 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 AL158073.1-201ENST00000426848 1104 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 BX470209.2-201ENST00000442086 928 ntTSL 3 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 MTCO1P27-201ENST00000448269 226 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 SLC31A1P1-201ENST00000451221 567 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 ARAFP3-201ENST00000454154 490 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 PCMTD1P1-201ENST00000455560 355 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 UCK2-205ENST00000469256 753 ntTSL 3 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 RN7SL815P-201ENST00000470970 290 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 PFN1P6-201ENST00000476786 399 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 RNU6-182P-201ENST00000516970 105 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 RN7SKP197-201ENST00000517077 297 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 BCAP31P2-201ENST00000563143 399 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 BCAP31P1-201ENST00000565437 385 ntBASIC8.34□□□□□ -1.07
LHX6Q9UPM6 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 LGALS17A-205ENST00000598736 1111 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 XIST-210ENST00000602863 775 ntTSL 3 BASIC8.34□□□□□ -1.07
LHX6Q9UPM6 AC090950.1-201ENST00000604625 830 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms