Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 CYP2AC1P-201ENST00000407830 1173 ntBASIC8.6□□□□□ -1.03
USP35Q9P2H5 RNA5SP251-201ENST00000410614 137 ntBASIC8.6□□□□□ -1.03
USP35Q9P2H5 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USP35Q9P2H5 AL713922.1-201ENST00000416477 747 ntBASIC8.6□□□□□ -1.03
USP35Q9P2H5 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 AL590762.3-201ENST00000436372 640 ntBASIC8.6□□□□□ -1.03
USP35Q9P2H5 ATP6V1E1P1-201ENST00000439215 681 ntBASIC8.6□□□□□ -1.03
USP35Q9P2H5 DNAJC19P5-201ENST00000443295 316 ntBASIC8.6□□□□□ -1.03
USP35Q9P2H5 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 RPS26P39-201ENST00000469206 341 ntBASIC8.6□□□□□ -1.03
USP35Q9P2H5 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 AC067904.2-201ENST00000517322 1283 ntBASIC8.6□□□□□ -1.03
USP35Q9P2H5 AC021269.1-201ENST00000526860 705 ntBASIC8.6□□□□□ -1.03
USP35Q9P2H5 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USP35Q9P2H5 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 TPRX1P1-201ENST00000557620 319 ntBASIC8.6□□□□□ -1.03
USP35Q9P2H5 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 AC079298.2-201ENST00000623885 459 ntBASIC8.6□□□□□ -1.03
USP35Q9P2H5 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 AC079776.5-201ENST00000641920 211 ntBASIC8.6□□□□□ -1.03
USP35Q9P2H5 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
USP35Q9P2H5 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USP35Q9P2H5 AC110597.1-201ENST00000562669 3176 ntBASIC8.6□□□□□ -1.03
USP35Q9P2H5 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USP35Q9P2H5 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USP35Q9P2H5 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
USP35Q9P2H5 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC8.6□□□□□ -1.03
USP35Q9P2H5 AC005225.5-201ENST00000623547 2225 ntBASIC8.6□□□□□ -1.03
USP35Q9P2H5 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
USP35Q9P2H5 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC8.59□□□□□ -1.03
USP35Q9P2H5 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
USP35Q9P2H5 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
USP35Q9P2H5 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
USP35Q9P2H5 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
USP35Q9P2H5 AC013488.1-201ENST00000526618 1838 ntBASIC8.59□□□□□ -1.03
USP35Q9P2H5 NEK2P2-201ENST00000438441 1338 ntBASIC8.59□□□□□ -1.03
USP35Q9P2H5 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC8.59□□□□□ -1.03
USP35Q9P2H5 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
USP35Q9P2H5 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
USP35Q9P2H5 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
USP35Q9P2H5 SNORA70H-201ENST00000383910 135 ntBASIC8.59□□□□□ -1.03
USP35Q9P2H5 SNORA70J-201ENST00000384182 135 ntBASIC8.59□□□□□ -1.03
USP35Q9P2H5 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
USP35Q9P2H5 MED28P4-201ENST00000433137 572 ntBASIC8.59□□□□□ -1.03
USP35Q9P2H5 AC007563.3-201ENST00000433233 371 ntBASIC8.59□□□□□ -1.03
USP35Q9P2H5 AL451136.1-201ENST00000435399 325 ntBASIC8.59□□□□□ -1.03
USP35Q9P2H5 AP000949.1-201ENST00000438328 629 ntBASIC8.59□□□□□ -1.03
USP35Q9P2H5 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC8.59□□□□□ -1.03
USP35Q9P2H5 AL355355.1-201ENST00000442900 793 ntBASIC8.59□□□□□ -1.03
USP35Q9P2H5 RPL36AP39-201ENST00000445859 318 ntBASIC8.59□□□□□ -1.03
USP35Q9P2H5 AL133351.3-201ENST00000454998 193 ntBASIC8.59□□□□□ -1.03
USP35Q9P2H5 ACA64.1-201ENST00000459171 127 ntBASIC8.59□□□□□ -1.03
USP35Q9P2H5 UBFD1P1-201ENST00000473259 814 ntBASIC8.59□□□□□ -1.03
USP35Q9P2H5 RN7SL717P-201ENST00000478343 297 ntBASIC8.59□□□□□ -1.03
USP35Q9P2H5 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC8.59□□□□□ -1.03
USP35Q9P2H5 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC8.59□□□□□ -1.03
USP35Q9P2H5 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC8.59□□□□□ -1.03
USP35Q9P2H5 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC8.59□□□□□ -1.03
USP35Q9P2H5 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC8.59□□□□□ -1.03
USP35Q9P2H5 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC8.59□□□□□ -1.03
USP35Q9P2H5 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC8.59□□□□□ -1.03
USP35Q9P2H5 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC8.59□□□□□ -1.03
USP35Q9P2H5 MIR4489-201ENST00000578869 62 ntBASIC8.59□□□□□ -1.03
USP35Q9P2H5 SNORD95-201ENST00000579879 68 ntBASIC8.59□□□□□ -1.03
USP35Q9P2H5 AP001496.3-201ENST00000580230 913 ntBASIC8.59□□□□□ -1.03
USP35Q9P2H5 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC8.59□□□□□ -1.03
USP35Q9P2H5 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC8.59□□□□□ -1.03
USP35Q9P2H5 AC009237.12-201ENST00000604755 742 ntBASIC8.59□□□□□ -1.03
USP35Q9P2H5 AC135803.1-201ENST00000608748 565 ntBASIC8.59□□□□□ -1.03
USP35Q9P2H5 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
USP35Q9P2H5 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
USP35Q9P2H5 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC8.59□□□□□ -1.03
USP35Q9P2H5 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC8.59□□□□□ -1.03
USP35Q9P2H5 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC8.59□□□□□ -1.03
USP35Q9P2H5 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
USP35Q9P2H5 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC8.59□□□□□ -1.03
USP35Q9P2H5 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
USP35Q9P2H5 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
USP35Q9P2H5 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
USP35Q9P2H5 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC8.59□□□□□ -1.04
USP35Q9P2H5 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC8.58□□□□□ -1.04
USP35Q9P2H5 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
USP35Q9P2H5 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
USP35Q9P2H5 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC8.58□□□□□ -1.04
USP35Q9P2H5 UGT2B24P-201ENST00000514441 1597 ntBASIC8.58□□□□□ -1.04
USP35Q9P2H5 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
USP35Q9P2H5 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
USP35Q9P2H5 RNA5SP273-201ENST00000362484 113 ntBASIC8.58□□□□□ -1.04
USP35Q9P2H5 RNU6-40P-201ENST00000384254 107 ntBASIC8.58□□□□□ -1.04
USP35Q9P2H5 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC8.58□□□□□ -1.04
USP35Q9P2H5 CYCSP53-201ENST00000455540 265 ntBASIC8.58□□□□□ -1.04
USP35Q9P2H5 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms