Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 U1.31-201ENST00000620022 160 ntBASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 AL592429.1-201ENST00000403909 1473 ntBASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TM9SF3Q9HD45 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 AC020633.1-201ENST00000468439 2247 ntBASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 CIR1P2-201ENST00000514821 1342 ntBASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 AC016908.1-201ENST00000442571 1219 ntBASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 RPL36AP39-201ENST00000445859 318 ntBASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 ZNF619P1-201ENST00000446539 752 ntBASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 RN7SL717P-201ENST00000478343 297 ntBASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 AC093815.1-201ENST00000508637 280 ntBASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 WBP1LP3-201ENST00000523033 208 ntBASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 ZNF322P1-201ENST00000568013 1209 ntBASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 FAM72A-208ENST00000607379 1139 ntBASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 AP005431.1-201ENST00000618479 319 ntBASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
TM9SF3Q9HD45 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 RNU1-150P-201ENST00000362491 162 ntBASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 RN7SKP186-201ENST00000365371 303 ntBASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 RNU11-201ENST00000387069 134 ntBASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 AL354890.1-201ENST00000413730 346 ntBASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 UBE2V1P14-201ENST00000415815 558 ntBASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 BX323845.3-201ENST00000428215 527 ntBASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 BX679664.2-201ENST00000439282 283 ntBASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 AL445665.1-202ENST00000452436 324 ntBASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 AC007494.1-201ENST00000562293 760 ntBASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 AL360012.1-201ENST00000602813 131 ntBASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 AC024255.1-201ENST00000614376 102 ntBASIC6.06□□□□□ -1.44
TM9SF3Q9HD45 AL445649.1-201ENST00000615941 691 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms