Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL603882.1-201ENST00000463059 681 ntBASIC6.14□□□□□ -1.43
PCDH9Q9HC56 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 MTND2P31-201ENST00000512602 616 ntBASIC6.14□□□□□ -1.43
PCDH9Q9HC56 AC024405.1-201ENST00000532521 1042 ntBASIC6.14□□□□□ -1.43
PCDH9Q9HC56 AC026826.3-201ENST00000561747 158 ntBASIC6.14□□□□□ -1.43
PCDH9Q9HC56 AC092332.1-201ENST00000563684 829 ntBASIC6.14□□□□□ -1.43
PCDH9Q9HC56 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 AC060780.2-201ENST00000589047 198 ntBASIC6.14□□□□□ -1.43
PCDH9Q9HC56 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 AL645933.2-201ENST00000606743 1207 ntBASIC6.14□□□□□ -1.43
PCDH9Q9HC56 AC239803.2-201ENST00000610161 430 ntBASIC6.14□□□□□ -1.43
PCDH9Q9HC56 AL353684.1-201ENST00000622677 1120 ntBASIC6.14□□□□□ -1.43
PCDH9Q9HC56 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 AC025470.1-201ENST00000510053 2032 ntBASIC6.14□□□□□ -1.43
PCDH9Q9HC56 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDH9Q9HC56 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 U3.10-201ENST00000364459 214 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 RN7SKP187-201ENST00000365536 330 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 RNU11-201ENST00000387069 134 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 RPL5P10-201ENST00000445207 894 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 FTLP8-201ENST00000446770 267 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 AC009963.3-201ENST00000458090 486 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 RN7SL168P-201ENST00000463821 279 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 RN7SL741P-201ENST00000482473 289 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 RNA5SP473-201ENST00000516402 125 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 RN7SKP35-201ENST00000517210 151 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 AC090424.1-201ENST00000535243 736 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 AL163952.1-202ENST00000569625 600 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 AC023389.2-201ENST00000580031 955 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 AC025857.2-201ENST00000602711 238 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 AL360012.1-201ENST00000602813 131 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 AC091167.5-201ENST00000605689 894 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 AC073592.6-201ENST00000624271 415 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 AC233968.1-201ENST00000611212 1300 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 RBMY1HP-201ENST00000382759 1389 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 AL158152.1-201ENST00000602652 1435 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 AC104966.1-201ENST00000467010 1464 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 MTCO1P28-201ENST00000574177 1528 ntBASIC6.13□□□□□ -1.43
PCDH9Q9HC56 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.13□□□□□ -1.43
PCDH9Q9HC56 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 SNORA51.9-201ENST00000384295 124 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 RNA5SP431-201ENST00000410312 120 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 HMGB1P32-201ENST00000425971 565 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 PNKDP1-201ENST00000435914 430 ntBASIC6.12□□□□□ -1.43
PCDH9Q9HC56 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PCDH9Q9HC56 RPL6P30-201ENST00000443382 862 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms