Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 RNU6-185P-201ENST00000384421 107 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AL034374.1-201ENST00000406329 351 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AC009413.1-201ENST00000414823 399 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AL356320.2-201ENST00000417263 507 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AC009362.1-201ENST00000427253 406 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 HIGD1AP12-201ENST00000427832 281 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AL353093.1-201ENST00000441292 436 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AC005517.1-201ENST00000452091 489 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 RNU7-140P-201ENST00000459546 60 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AC074386.1-206ENST00000487102 761 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 RPL21P42-201ENST00000488408 464 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AC082651.2-201ENST00000496833 166 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 OR4A2P-201ENST00000527276 913 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 MTCYBP27-201ENST00000555160 670 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 HMGN1P26-201ENST00000558737 303 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AC095057.3-201ENST00000567102 1157 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AC005244.1-201ENST00000582566 339 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AC063962.1-201ENST00000608199 521 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AC009237.15-201ENST00000610252 501 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AC015660.5-201ENST00000623238 564 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AL390318.1-201ENST00000624564 687 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AC022905.1-201ENST00000503430 3048 ntBASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
TRIM55Q9BYV6 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
TRIM55Q9BYV6 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.29
TRIM55Q9BYV6 MTND4P10-201ENST00000446199 1363 ntBASIC6.96□□□□□ -1.29
TRIM55Q9BYV6 AC111188.2-201ENST00000529697 1387 ntBASIC6.96□□□□□ -1.29
TRIM55Q9BYV6 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
TRIM55Q9BYV6 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.29
TRIM55Q9BYV6 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.96□□□□□ -1.29
TRIM55Q9BYV6 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.96□□□□□ -1.29
TRIM55Q9BYV6 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 RNU6-353P-201ENST00000364266 108 ntBASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 AC105402.1-201ENST00000413336 545 ntBASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 UQCRHP1-204ENST00000424609 274 ntBASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 RPL5P27-201ENST00000437011 881 ntBASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 AL356133.1-201ENST00000444762 372 ntBASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 AC112492.1-201ENST00000449607 712 ntBASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 AC025271.1-201ENST00000485045 429 ntBASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 RPL10P7-201ENST00000495649 625 ntBASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 AC091951.3-201ENST00000504093 246 ntBASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 MRPS5P3-201ENST00000515577 166 ntBASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.96□□□□□ -1.3
TRIM55Q9BYV6 AC130366.1-201ENST00000526505 1192 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms