Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SNORA10B-201ENST00000384458 133 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 RNU6-253P-201ENST00000384730 105 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 RNA5SP176-201ENST00000390956 110 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 U3.31-201ENST00000408113 216 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 RN7SKP286-201ENST00000410894 299 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 RPLP1P10-201ENST00000413972 339 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 MTATP6P29-201ENST00000415057 132 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AC015977.2-201ENST00000420852 567 ntTSL 3 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AHCYP8-201ENST00000425108 209 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 ELOCP14-201ENST00000428070 331 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AL136529.1-201ENST00000430540 610 ntTSL 3 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 Z97634.1-203ENST00000435229 471 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 MTCYBP45-201ENST00000435243 565 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 ELOCP7-201ENST00000439968 331 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 RPL21P134-201ENST00000453468 483 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 RAD23BP3-201ENST00000454157 1152 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 RPL35AP19-201ENST00000469425 329 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 SUMO1P1-201ENST00000497904 306 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AC005000.1-201ENST00000536192 288 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AC006504.6-201ENST00000590142 199 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AC124303.1-201ENST00000605703 360 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AL132822.1-201ENST00000617063 513 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 DUSP3-201ENST00000226004 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 NEUROD6-201ENST00000297142 2131 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 OTUB2-201ENST00000203664 3922 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 CNOT4-212ENST00000541284 3563 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 PLCH1-204ENST00000460012 6413 ntAPPRIS P3 TSL 5 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 MTND5P16-201ENST00000460269 1703 ntBASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 PLP1-221ENST00000619236 2896 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 CDH11-202ENST00000394156 6874 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.61□□□□□ -1.19
COL25A1Q9BXS0 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 ZNF80-203ENST00000619534 2216 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 FREM1-203ENST00000380894 2481 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 ERVMER34-1-202ENST00000443173 3830 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 LINC01258-201ENST00000512517 2059 ntTSL 2 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 S100A13-201ENST00000339556 514 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 Y_RNA.89-201ENST00000363031 102 ntBASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 AC018630.2-202ENST00000422992 927 ntBASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 OR7E125P-201ENST00000443450 846 ntBASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 RPL7AP52-201ENST00000458096 790 ntBASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 OR9A3P-202ENST00000485185 878 ntBASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 IGKV1D-16-201ENST00000492446 378 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 HMGN1P16-201ENST00000508308 283 ntBASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 SDHCP4-201ENST00000532834 510 ntBASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 AC093524.1-201ENST00000564266 1094 ntBASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 MIR378C-201ENST00000578683 81 ntBASIC7.6□□□□□ -1.19
COL25A1Q9BXS0 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms