Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 AC063923.1-201ENST00000478982 1619 ntBASIC8.32□□□□□ -1.08
SIN3AQ96ST3 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 NLN-202ENST00000502464 8354 ntTSL 5 BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 RNA5SP326-201ENST00000363209 110 ntBASIC8.31□□□□□ -1.08
SIN3AQ96ST3 AL031985.1-201ENST00000392713 418 ntBASIC8.31□□□□□ -1.08
SIN3AQ96ST3 AC096921.1-201ENST00000411661 375 ntBASIC8.31□□□□□ -1.08
SIN3AQ96ST3 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 AL590399.2-201ENST00000427536 309 ntBASIC8.31□□□□□ -1.08
SIN3AQ96ST3 RPL34P27-201ENST00000428810 349 ntBASIC8.31□□□□□ -1.08
SIN3AQ96ST3 BX119321.1-201ENST00000428912 797 ntBASIC8.31□□□□□ -1.08
SIN3AQ96ST3 AC079080.1-201ENST00000479841 822 ntBASIC8.31□□□□□ -1.08
SIN3AQ96ST3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 SNORA43.3-201ENST00000517240 103 ntBASIC8.31□□□□□ -1.08
SIN3AQ96ST3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 DHFRP1-201ENST00000579682 559 ntBASIC8.31□□□□□ -1.08
SIN3AQ96ST3 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SIN3AQ96ST3 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SIN3AQ96ST3 AL161912.4-201ENST00000623889 2468 ntBASIC8.3□□□□□ -1.08
SIN3AQ96ST3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
SIN3AQ96ST3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
SIN3AQ96ST3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SIN3AQ96ST3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC8.3□□□□□ -1.08
SIN3AQ96ST3 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
SIN3AQ96ST3 DNAJA1P3-201ENST00000399417 1194 ntBASIC8.3□□□□□ -1.08
SIN3AQ96ST3 CDY17P-201ENST00000414121 1282 ntBASIC8.3□□□□□ -1.08
SIN3AQ96ST3 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC8.3□□□□□ -1.08
SIN3AQ96ST3 EEF1A1P29-201ENST00000416082 1096 ntBASIC8.3□□□□□ -1.08
SIN3AQ96ST3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC8.3□□□□□ -1.08
SIN3AQ96ST3 AC019205.1-201ENST00000421830 730 ntBASIC8.3□□□□□ -1.08
SIN3AQ96ST3 AL389925.1-201ENST00000432257 728 ntBASIC8.3□□□□□ -1.08
SIN3AQ96ST3 AC242426.1-201ENST00000435270 960 ntBASIC8.3□□□□□ -1.08
SIN3AQ96ST3 AL445665.1-202ENST00000452436 324 ntBASIC8.3□□□□□ -1.08
SIN3AQ96ST3 RNU1-88P-201ENST00000459274 128 ntBASIC8.3□□□□□ -1.08
SIN3AQ96ST3 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
SIN3AQ96ST3 ST13P12-201ENST00000508958 1094 ntBASIC8.3□□□□□ -1.08
SIN3AQ96ST3 AC090568.1-201ENST00000509499 856 ntBASIC8.3□□□□□ -1.08
SIN3AQ96ST3 HMGB1P42-201ENST00000532126 553 ntBASIC8.3□□□□□ -1.08
SIN3AQ96ST3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC8.3□□□□□ -1.08
SIN3AQ96ST3 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC8.3□□□□□ -1.08
SIN3AQ96ST3 AC008521.2-201ENST00000591021 259 ntBASIC8.3□□□□□ -1.08
SIN3AQ96ST3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC8.3□□□□□ -1.08
SIN3AQ96ST3 AL512356.3-201ENST00000623005 461 ntBASIC8.3□□□□□ -1.08
SIN3AQ96ST3 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC8.3□□□□□ -1.08
SIN3AQ96ST3 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SIN3AQ96ST3 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
SIN3AQ96ST3 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
SIN3AQ96ST3 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC8.3□□□□□ -1.08
SIN3AQ96ST3 MAPK10-270ENST00000641102 3538 ntBASIC8.3□□□□□ -1.08
SIN3AQ96ST3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
SIN3AQ96ST3 AC009135.2-201ENST00000624136 1768 ntBASIC8.3□□□□□ -1.08
SIN3AQ96ST3 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SIN3AQ96ST3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SIN3AQ96ST3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SIN3AQ96ST3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SIN3AQ96ST3 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC8.29□□□□□ -1.08
SIN3AQ96ST3 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SIN3AQ96ST3 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
SIN3AQ96ST3 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SIN3AQ96ST3 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SIN3AQ96ST3 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
SIN3AQ96ST3 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SIN3AQ96ST3 RNA5SP284-201ENST00000384547 118 ntBASIC8.29□□□□□ -1.08
SIN3AQ96ST3 AK4P4-201ENST00000419465 646 ntBASIC8.29□□□□□ -1.08
SIN3AQ96ST3 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC8.29□□□□□ -1.08
SIN3AQ96ST3 KRT8P51-201ENST00000438938 274 ntBASIC8.29□□□□□ -1.08
SIN3AQ96ST3 RN7SL570P-201ENST00000484405 292 ntBASIC8.29□□□□□ -1.08
SIN3AQ96ST3 AC021146.10-201ENST00000515628 706 ntBASIC8.29□□□□□ -1.08
SIN3AQ96ST3 RN7SKP67-201ENST00000515905 235 ntBASIC8.29□□□□□ -1.08
SIN3AQ96ST3 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC8.29□□□□□ -1.08
SIN3AQ96ST3 MAL2-207ENST00000522828 603 ntTSL 3 BASIC8.29□□□□□ -1.08
SIN3AQ96ST3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC8.29□□□□□ -1.08
SIN3AQ96ST3 AC139697.1-201ENST00000548429 745 ntBASIC8.29□□□□□ -1.08
SIN3AQ96ST3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC8.29□□□□□ -1.08
SIN3AQ96ST3 AL049840.6-201ENST00000604583 345 ntBASIC8.29□□□□□ -1.08
SIN3AQ96ST3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms