Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VPS35Q96QK1 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS35Q96QK1 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VPS35Q96QK1 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VPS35Q96QK1 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS35Q96QK1 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS35Q96QK1 RNFT1P3-201ENST00000340898 1052 ntBASIC5.94□□□□□ -1.46
VPS35Q96QK1 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS35Q96QK1 OR7E156P-201ENST00000400303 464 ntBASIC5.94□□□□□ -1.46
VPS35Q96QK1 RN7SKP240-201ENST00000410583 375 ntBASIC5.94□□□□□ -1.46
VPS35Q96QK1 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 KIF4CP-201ENST00000422742 1279 ntBASIC5.94□□□□□ -1.46
VPS35Q96QK1 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 SDC4P-201ENST00000453285 601 ntBASIC5.94□□□□□ -1.46
VPS35Q96QK1 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 CST12P-201ENST00000457644 362 ntBASIC5.94□□□□□ -1.46
VPS35Q96QK1 AC124945.1-201ENST00000485133 188 ntBASIC5.94□□□□□ -1.46
VPS35Q96QK1 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 OR4A42P-201ENST00000531397 938 ntBASIC5.94□□□□□ -1.46
VPS35Q96QK1 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 AL049779.3-201ENST00000557141 606 ntBASIC5.94□□□□□ -1.46
VPS35Q96QK1 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 MIR132-201ENST00000591554 101 ntBASIC5.94□□□□□ -1.46
VPS35Q96QK1 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 AC079315.1-201ENST00000602952 623 ntBASIC5.94□□□□□ -1.46
VPS35Q96QK1 MIR6793-201ENST00000612376 63 ntBASIC5.94□□□□□ -1.46
VPS35Q96QK1 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 AC129778.1-202ENST00000623812 261 ntBASIC5.94□□□□□ -1.46
VPS35Q96QK1 AL591379.1-207ENST00000635982 261 ntBASIC5.94□□□□□ -1.46
VPS35Q96QK1 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.94□□□□□ -1.46
VPS35Q96QK1 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
VPS35Q96QK1 AC092724.1-201ENST00000624623 3397 ntBASIC5.93□□□□□ -1.46
VPS35Q96QK1 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS35Q96QK1 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS35Q96QK1 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS35Q96QK1 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS35Q96QK1 RNA5SP211-201ENST00000365516 117 ntBASIC5.93□□□□□ -1.46
VPS35Q96QK1 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
VPS35Q96QK1 PEX12P1-201ENST00000400284 1048 ntBASIC5.93□□□□□ -1.46
VPS35Q96QK1 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS35Q96QK1 AL445928.1-201ENST00000435545 222 ntBASIC5.93□□□□□ -1.46
VPS35Q96QK1 TUBB4BP6-201ENST00000437576 479 ntBASIC5.93□□□□□ -1.46
VPS35Q96QK1 VN1R110P-201ENST00000438988 971 ntBASIC5.93□□□□□ -1.46
VPS35Q96QK1 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS35Q96QK1 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS35Q96QK1 RPS7P3-201ENST00000443360 580 ntBASIC5.93□□□□□ -1.46
VPS35Q96QK1 BMS1P10-201ENST00000443754 1120 ntBASIC5.93□□□□□ -1.46
VPS35Q96QK1 AL359839.1-201ENST00000451975 1160 ntBASIC5.93□□□□□ -1.46
VPS35Q96QK1 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS35Q96QK1 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS35Q96QK1 AL445687.2-201ENST00000458156 728 ntBASIC5.93□□□□□ -1.46
VPS35Q96QK1 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.93□□□□□ -1.46
VPS35Q96QK1 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.93□□□□□ -1.46
VPS35Q96QK1 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS35Q96QK1 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS35Q96QK1 SETP21-201ENST00000514799 892 ntBASIC5.93□□□□□ -1.46
VPS35Q96QK1 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS35Q96QK1 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS35Q96QK1 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS35Q96QK1 NPM1P5-201ENST00000557228 838 ntBASIC5.93□□□□□ -1.46
VPS35Q96QK1 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS35Q96QK1 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS35Q96QK1 AC090826.1-203ENST00000569235 490 ntBASIC5.93□□□□□ -1.46
VPS35Q96QK1 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS35Q96QK1 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS35Q96QK1 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS35Q96QK1 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS35Q96QK1 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS35Q96QK1 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS35Q96QK1 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
VPS35Q96QK1 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
VPS35Q96QK1 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
VPS35Q96QK1 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS35Q96QK1 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS35Q96QK1 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS35Q96QK1 HCFC2P1-201ENST00000392864 1592 ntBASIC5.93□□□□□ -1.46
VPS35Q96QK1 AC005261.6-201ENST00000623072 1387 ntBASIC5.93□□□□□ -1.46
VPS35Q96QK1 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS35Q96QK1 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS35Q96QK1 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS35Q96QK1 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS35Q96QK1 AC090220.1-201ENST00000593078 1699 ntBASIC5.92□□□□□ -1.46
VPS35Q96QK1 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS35Q96QK1 OOSP1-201ENST00000398992 1270 ntBASIC5.92□□□□□ -1.46
VPS35Q96QK1 AC016739.1-201ENST00000405359 345 ntBASIC5.92□□□□□ -1.46
VPS35Q96QK1 SNRPEP6-201ENST00000407465 277 ntBASIC5.92□□□□□ -1.46
VPS35Q96QK1 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms