Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AC024651.2-201ENST00000562480 2098 ntBASIC6.22□□□□□ -1.41
HMGB4Q8WW32 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AC105114.1-201ENST00000624795 1862 ntBASIC6.22□□□□□ -1.41
HMGB4Q8WW32 CUBNP3-201ENST00000457461 1784 ntBASIC6.22□□□□□ -1.41
HMGB4Q8WW32 RNA5SP242-201ENST00000364171 118 ntBASIC6.22□□□□□ -1.41
HMGB4Q8WW32 MIR421-201ENST00000365696 85 ntBASIC6.22□□□□□ -1.41
HMGB4Q8WW32 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 Z68694.1-201ENST00000413929 841 ntBASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 NDUFS5P5-201ENST00000437256 321 ntBASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AC023818.1-201ENST00000498379 384 ntBASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AC096754.1-201ENST00000508904 818 ntBASIC6.22□□□□□ -1.41
HMGB4Q8WW32 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 SCARNA18.1-201ENST00000516330 83 ntBASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AC112191.2-201ENST00000522428 333 ntBASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 HMGB1P51-201ENST00000605166 638 ntBASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AC018690.1-201ENST00000608144 626 ntBASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AC024933.1-201ENST00000608472 348 ntBASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AC006924.1-201ENST00000610750 559 ntBASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AL445647.2-201ENST00000615170 130 ntBASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AC022325.1-201ENST00000502748 2199 ntBASIC6.22□□□□□ -1.41
HMGB4Q8WW32 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AF287957.1-201ENST00000607368 1595 ntBASIC6.22□□□□□ -1.41
HMGB4Q8WW32 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 AC078880.4-201ENST00000617627 1749 ntBASIC6.22□□□□□ -1.41
HMGB4Q8WW32 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HMGB4Q8WW32 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.21□□□□□ -1.41
HMGB4Q8WW32 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.21□□□□□ -1.41
HMGB4Q8WW32 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
HMGB4Q8WW32 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.21□□□□□ -1.41
HMGB4Q8WW32 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
HMGB4Q8WW32 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
HMGB4Q8WW32 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 RNA5SP478-201ENST00000364657 115 ntBASIC6.21□□□□□ -1.42
HMGB4Q8WW32 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 RNF19BPX-201ENST00000426224 625 ntBASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AC023141.6-201ENST00000429418 337 ntBASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 PCBP2P1-201ENST00000437262 977 ntBASIC6.21□□□□□ -1.42
HMGB4Q8WW32 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 HMGN1P36-201ENST00000446623 298 ntBASIC6.21□□□□□ -1.42
HMGB4Q8WW32 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AP006222.1-205ENST00000450734 457 ntBASIC6.21□□□□□ -1.42
HMGB4Q8WW32 RN7SL273P-201ENST00000481561 299 ntBASIC6.21□□□□□ -1.42
HMGB4Q8WW32 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 RNU6-319P-201ENST00000516025 108 ntBASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AC079600.1-201ENST00000550326 297 ntBASIC6.21□□□□□ -1.42
HMGB4Q8WW32 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AC008555.7-201ENST00000605008 583 ntBASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AL355802.4-201ENST00000607635 548 ntBASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AC084824.5-201ENST00000612009 413 ntBASIC6.21□□□□□ -1.42
HMGB4Q8WW32 MIR6793-201ENST00000612376 63 ntBASIC6.21□□□□□ -1.42
HMGB4Q8WW32 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AL136228.1-201ENST00000622221 319 ntBASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AP003499.2-201ENST00000624100 483 ntBASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AC018659.2-201ENST00000624690 715 ntBASIC6.21□□□□□ -1.42
HMGB4Q8WW32 AC106858.1-201ENST00000637497 429 ntBASIC6.21□□□□□ -1.42
HMGB4Q8WW32 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms