Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLDND2Q8NHS1 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 AP002833.3-201ENST00000625075 2265 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 OR52B3P-201ENST00000314715 928 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 RNA5SP375-201ENST00000362975 119 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 RN7SKP69-201ENST00000365390 305 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 RNA5SP284-201ENST00000384547 118 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 SNORA17A-201ENST00000391185 133 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 NDUFS5P5-201ENST00000437256 321 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 AL445466.1-201ENST00000448432 357 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 RPL31P15-201ENST00000449770 338 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 AC011476.1-201ENST00000466725 307 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 AC093719.1-201ENST00000480427 441 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 PPIAP19-201ENST00000486414 492 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 RN7SL284P-201ENST00000498823 275 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 WBP1LP3-201ENST00000523033 208 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 NPM1P42-201ENST00000560329 862 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 NPIPB1P-202ENST00000588786 828 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 AC141002.1-201ENST00000607025 279 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 AL021368.3-201ENST00000607119 578 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 MIR6809-201ENST00000612189 116 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 SNORA17.5-201ENST00000630429 132 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 MIR4302-201ENST00000638058 60 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 AC018628.1-201ENST00000624147 3819 ntBASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.07□□□□□ -1.6
CLDND2Q8NHS1 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 AC114876.1-201ENST00000490962 1366 ntBASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 RN7SKP81-201ENST00000365603 331 ntBASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 AL096711.1-201ENST00000404780 554 ntBASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 AC009506.2-201ENST00000420635 840 ntBASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 MTND6P12-201ENST00000428247 522 ntBASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 AC242426.1-201ENST00000435270 960 ntBASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 AC016027.4-201ENST00000450866 277 ntBASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 NXT1P1-201ENST00000458481 316 ntBASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 AC073594.1-201ENST00000462065 364 ntBASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 MIR3189-201ENST00000578735 73 ntBASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDND2Q8NHS1 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms