Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 RPL12P13-201ENST00000310055 497 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 FAM3C2-201ENST00000312214 681 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 RN7SKP47-201ENST00000365347 328 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 CGA-201ENST00000369582 729 ntTSL 5 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 RPL9P21-201ENST00000392269 505 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AL035419.1-201ENST00000397037 564 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AL079342.2-201ENST00000403367 482 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 MIR1204-201ENST00000408388 67 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 HSPE1P16-201ENST00000426640 348 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AC015983.1-201ENST00000441577 373 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 NDUFA12P1-201ENST00000455914 406 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 RPL23AP37-201ENST00000479658 549 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 RPS4XP23-201ENST00000487801 237 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 OR10J9P-201ENST00000511932 987 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 MTCYBP44-201ENST00000514835 823 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 IGLC4-201ENST00000517690 248 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 EEF1B2P2-201ENST00000519625 676 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AC007537.1-201ENST00000539347 327 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AC111186.1-201ENST00000604684 130 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AF246928.1-201ENST00000623768 87 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AC007494.3-201ENST00000624660 743 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 PSG10P-201ENST00000501199 1500 ntBASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.58□□□□□ -1.36
ARHGEF39Q8N4T4 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 AL672167.2-201ENST00000377164 879 ntBASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 MIR199B-201ENST00000384849 110 ntBASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 HMGB3P18-201ENST00000406327 590 ntBASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 AC093716.1-201ENST00000435923 377 ntBASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 RPS27AP2-201ENST00000457576 465 ntBASIC6.57□□□□□ -1.36
ARHGEF39Q8N4T4 AC011979.1-201ENST00000472300 483 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms