Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 RPL23AP17-201ENST00000401064 499 ntBASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 RN7SKP29-201ENST00000410957 272 ntBASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AC126120.1-201ENST00000431082 470 ntBASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AK3P5-201ENST00000432033 519 ntBASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AL512637.1-201ENST00000439523 1231 ntBASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AC084754.1-201ENST00000463466 464 ntBASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AC011476.1-201ENST00000466725 307 ntBASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 GAPDHP71-201ENST00000511530 1003 ntBASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 IGKV2-4-201ENST00000523070 340 ntBASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 IGLV3-30-201ENST00000524362 298 ntBASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 TRIM51DP-201ENST00000529746 596 ntBASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 ZNF322P1-201ENST00000568013 1209 ntBASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AC100767.2-201ENST00000604840 693 ntBASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 FAM27E4-201ENST00000605259 342 ntBASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AC016590.3-201ENST00000611171 753 ntBASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AC009120.7-201ENST00000623452 780 ntBASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AL161756.3-201ENST00000641216 2071 ntBASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 AC005224.3-201ENST00000584683 2140 ntBASIC5.44□□□□□ -1.54
C9orf40Q8IXQ3 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 BRAFP1-201ENST00000445336 2703 ntBASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 OR52B3P-201ENST00000314715 928 ntBASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AC023490.2-201ENST00000359859 470 ntBASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 MRPL53P1-201ENST00000414323 319 ntBASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 RPS26P38-201ENST00000414476 348 ntBASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AL121578.1-201ENST00000428051 892 ntBASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AP006222.1-205ENST00000450734 457 ntBASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 TRBV5-2-201ENST00000489095 273 ntBASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 TOMM22P4-201ENST00000511318 336 ntBASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 MIR2117-201ENST00000516780 80 ntBASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 HMGN2P36-201ENST00000529541 409 ntBASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AC007346.2-201ENST00000564816 892 ntBASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AP001962.1-201ENST00000624114 559 ntBASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 OR8G3P-202ENST00000641572 1255 ntBASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 WDR95P-201ENST00000425638 1542 ntBASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 AC083837.1-201ENST00000565297 2994 ntBASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 ZNF101P1-201ENST00000435701 1720 ntBASIC5.43□□□□□ -1.54
C9orf40Q8IXQ3 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms