Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 TATDN1P1-201ENST00000414123 891 ntBASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 CYP4F34P-201ENST00000425951 481 ntBASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 SCDP1-201ENST00000455244 1081 ntBASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 RN7SL456P-201ENST00000469290 295 ntBASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AC105252.1-201ENST00000503089 286 ntBASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AC233724.10-201ENST00000510454 409 ntBASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 DKK2-202ENST00000510463 908 ntTSL 3 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 OR5M4P-201ENST00000529436 925 ntBASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AL669831.4-202ENST00000590817 238 ntBASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AC012360.2-201ENST00000609349 391 ntBASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 MIR6070-201ENST00000613967 103 ntBASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AL606760.4-201ENST00000617613 718 ntBASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 RN7SL680P-201ENST00000620379 299 ntBASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AC124864.2-201ENST00000624736 186 ntBASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 PSG10P-201ENST00000501199 1500 ntBASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AC006141.1-201ENST00000581917 2170 ntBASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 SF3A3P1-201ENST00000446317 1477 ntBASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NPAS3Q8IXF0 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 ZNF969P-201ENST00000510345 2341 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 EEF1A1P5-201ENST00000436459 1389 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 GANC-206ENST00000566442 2512 ntTSL 2 BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 MAPK10-343ENST00000641677 2546 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 RNU6-500P-201ENST00000362349 107 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 Y_RNA.279-201ENST00000364763 95 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 RNU6-534P-201ENST00000364877 106 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 SSX6-201ENST00000376932 562 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 RNU6-1005P-201ENST00000384519 107 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 Y_RNA.573-201ENST00000384763 105 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 MTCO1P56-201ENST00000401674 224 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 OR52N3P-201ENST00000413417 934 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 GAPDHP69-201ENST00000425504 1008 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 HSPE1P28-201ENST00000443139 211 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 AL451074.4-201ENST00000447545 470 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 AL031736.1-201ENST00000449688 618 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 VDAC2P4-201ENST00000452925 711 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 RAD23BP3-201ENST00000454157 1152 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 OR52A4P-201ENST00000472867 958 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 RN7SL152P-201ENST00000484176 298 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 NPM1P27-201ENST00000502784 830 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 AC104108.1-201ENST00000509930 412 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 FABP5P6-201ENST00000510588 409 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 CRADD-210ENST00000552033 622 ntTSL 3 BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 AL359212.1-201ENST00000556608 614 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 OR7E19P-202ENST00000589942 844 ntBASIC7.86□□□□□ -1.15
NPAS3Q8IXF0 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms