Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 MTND5P21-201ENST00000531961 522 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 AP004607.5-201ENST00000532034 217 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 AC027176.2-201ENST00000559166 746 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 NPM1P42-201ENST00000560329 862 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 BNIP3P27-201ENST00000599991 412 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 AL512413.1-201ENST00000606489 382 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 OR51C1P-201ENST00000608504 942 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHFQ7M4L6 AC022106.1-201ENST00000612834 766 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHFQ7M4L6 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHFQ7M4L6 AC068213.1-201ENST00000625124 226 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 AC000095.2-202ENST00000637415 154 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 AP000473.2-201ENST00000602659 1537 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHFQ7M4L6 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHFQ7M4L6 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHFQ7M4L6 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHFQ7M4L6 AL137058.3-201ENST00000624531 3099 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.51□□□□□ -1.53
SHFQ7M4L6 AC016745.2-201ENST00000608834 3443 ntBASIC5.51□□□□□ -1.53
SHFQ7M4L6 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHFQ7M4L6 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHFQ7M4L6 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SHFQ7M4L6 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SHFQ7M4L6 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SHFQ7M4L6 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SHFQ7M4L6 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SHFQ7M4L6 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SHFQ7M4L6 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SHFQ7M4L6 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SHFQ7M4L6 AP000568.1-201ENST00000282964 442 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SHFQ7M4L6 SNORD1C-201ENST00000363315 78 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SHFQ7M4L6 RAB5CP1-201ENST00000395972 580 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 PTGES3P2-201ENST00000407942 482 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 AC019205.1-201ENST00000421830 730 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 ELOCP6-201ENST00000429066 328 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SHFQ7M4L6 MTCO1P45-201ENST00000431457 267 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 GAPDHP23-201ENST00000444823 993 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 ELOCP12-201ENST00000458706 328 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 AC090602.1-201ENST00000469695 252 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 KHDC1P1-201ENST00000511053 508 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 RNA5SP418-201ENST00000515951 117 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 Vault.2-201ENST00000516519 98 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 TPM3P3-201ENST00000521343 354 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 OR9G2P-201ENST00000533326 880 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SHFQ7M4L6 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SHFQ7M4L6 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SHFQ7M4L6 AC106785.3-201ENST00000564064 847 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 AC093524.1-201ENST00000564266 1094 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 AC242628.1-201ENST00000606810 391 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 AC110792.4-201ENST00000609843 298 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 RNA5SP439-201ENST00000617595 124 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 MIR6849-201ENST00000618543 69 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SHFQ7M4L6 AC022306.3-201ENST00000619930 550 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 AP003499.2-201ENST00000624100 483 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 AL161756.3-201ENST00000641216 2071 ntBASIC5.5□□□□□ -1.53
SHFQ7M4L6 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SHFQ7M4L6 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SHFQ7M4L6 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms