Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
VSTM1Q6UX27 HDAC1P2-201ENST00000453661 1398 ntBASIC6.46□□□□□ -1.37
VSTM1Q6UX27 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.46□□□□□ -1.37
VSTM1Q6UX27 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 AC092651.1-201ENST00000426110 312 ntBASIC6.46□□□□□ -1.38
VSTM1Q6UX27 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 DNAJC19P5-201ENST00000443295 316 ntBASIC6.46□□□□□ -1.38
VSTM1Q6UX27 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 GXYLT1P1-201ENST00000446657 490 ntBASIC6.46□□□□□ -1.38
VSTM1Q6UX27 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 AL035690.1-201ENST00000490892 383 ntBASIC6.46□□□□□ -1.38
VSTM1Q6UX27 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 OR51A1P-201ENST00000511110 946 ntBASIC6.46□□□□□ -1.38
VSTM1Q6UX27 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 RN7SKP238-201ENST00000516483 249 ntBASIC6.46□□□□□ -1.38
VSTM1Q6UX27 IGKV2-19-201ENST00000518132 283 ntBASIC6.46□□□□□ -1.38
VSTM1Q6UX27 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 AC090651.1-201ENST00000567865 634 ntBASIC6.46□□□□□ -1.38
VSTM1Q6UX27 MTND4LP25-201ENST00000570218 163 ntBASIC6.46□□□□□ -1.38
VSTM1Q6UX27 MIR4420-201ENST00000583944 77 ntBASIC6.46□□□□□ -1.38
VSTM1Q6UX27 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 AC090330.1-201ENST00000588646 764 ntBASIC6.46□□□□□ -1.38
VSTM1Q6UX27 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 AL021368.3-201ENST00000607119 578 ntBASIC6.46□□□□□ -1.38
VSTM1Q6UX27 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 AC003992.1-201ENST00000635364 557 ntBASIC6.46□□□□□ -1.38
VSTM1Q6UX27 AC116667.2-201ENST00000641075 823 ntBASIC6.46□□□□□ -1.38
VSTM1Q6UX27 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 AC096921.2-201ENST00000561507 1916 ntBASIC6.46□□□□□ -1.38
VSTM1Q6UX27 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 CCNT2P1-201ENST00000423082 1315 ntBASIC6.46□□□□□ -1.38
VSTM1Q6UX27 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
VSTM1Q6UX27 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 ZNF402P-201ENST00000404435 3100 ntBASIC6.45□□□□□ -1.38
VSTM1Q6UX27 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 MTND4P21-201ENST00000453886 1357 ntBASIC6.45□□□□□ -1.38
VSTM1Q6UX27 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 RNU105B-201ENST00000364478 208 ntBASIC6.45□□□□□ -1.38
VSTM1Q6UX27 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AL121835.1-201ENST00000404250 354 ntBASIC6.45□□□□□ -1.38
VSTM1Q6UX27 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AL096829.1-201ENST00000413677 457 ntBASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 RPS15AP30-201ENST00000420976 390 ntBASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 SCAND3P1-201ENST00000439854 1060 ntBASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AC005077.1-201ENST00000449226 375 ntBASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 RNA5SP340-201ENST00000517132 107 ntBASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AL136520.1-202ENST00000555494 763 ntBASIC6.45□□□□□ -1.38
VSTM1Q6UX27 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AC009268.1-201ENST00000561352 1203 ntBASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AC022387.2-201ENST00000604050 448 ntBASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AC015802.5-201ENST00000607478 399 ntBASIC6.45□□□□□ -1.38
VSTM1Q6UX27 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AC008833.1-201ENST00000611633 691 ntBASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AL096712.1-201ENST00000614561 159 ntBASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AC096861.1-201ENST00000616652 240 ntBASIC6.45□□□□□ -1.38
VSTM1Q6UX27 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AP001157.1-201ENST00000550837 2339 ntBASIC6.45□□□□□ -1.38
VSTM1Q6UX27 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
VSTM1Q6UX27 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.45□□□□□ -1.38
VSTM1Q6UX27 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 388.4 ms