Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 TAAR4P-201ENST00000454843 1039 ntBASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 RN7SL390P-201ENST00000470634 284 ntBASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 AC098583.1-201ENST00000480875 255 ntBASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 RPL37AP8-201ENST00000494116 276 ntBASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 ATG10-AS1-201ENST00000504846 648 ntBASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 COL6A4P2-205ENST00000509855 506 ntBASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 RN7SKP67-201ENST00000515905 235 ntBASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 SNRPCP6-201ENST00000528310 210 ntBASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 AL445383.1-201ENST00000554689 874 ntBASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 AC002519.2-203ENST00000567043 837 ntBASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 AP002884.5-201ENST00000595053 1132 ntBASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 AC091948.2-201ENST00000636510 279 ntBASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 AC010132.4-201ENST00000569883 1368 ntBASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.27□□□□□ -1.57
PDLIM3Q53GG5 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC104966.1-201ENST00000467010 1464 ntBASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 UBBP1-201ENST00000392399 473 ntBASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 BX510359.3-201ENST00000422168 306 ntBASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC009237.1-201ENST00000442127 744 ntBASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 REG1CP-206ENST00000447469 496 ntBASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 RPL26P30-201ENST00000453533 435 ntBASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 RN7SL552P-201ENST00000462094 276 ntBASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 PPIAP19-201ENST00000486414 492 ntBASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 RN7SL284P-201ENST00000498823 275 ntBASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC091849.1-201ENST00000509920 121 ntBASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 RPL7L1P4-201ENST00000513004 707 ntBASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 OR4A6P-201ENST00000534364 970 ntBASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 NANOGNBP2-201ENST00000544753 553 ntBASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 PPIAP6-201ENST00000557078 499 ntBASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AL049840.5-201ENST00000602827 552 ntBASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 DIMT1P1-201ENST00000603970 763 ntBASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC008833.1-201ENST00000611633 691 ntBASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AL445649.1-201ENST00000615941 691 ntBASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 AC011815.2-201ENST00000618230 2021 ntBASIC5.26□□□□□ -1.57
PDLIM3Q53GG5 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms