Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 AC108865.2-201ENST00000606881 432 ntBASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 AL133481.2-203ENST00000607558 139 ntBASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 AC129778.1-202ENST00000623812 261 ntBASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 AL591379.1-207ENST00000635982 261 ntBASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 AL161901.1-201ENST00000624954 3425 ntBASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 AC126120.1-201ENST00000431082 470 ntBASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 EIF5AP4-201ENST00000441206 465 ntBASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 HMGN1P2-201ENST00000445197 310 ntBASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 RNU1-88P-201ENST00000459274 128 ntBASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 snoU13.29-201ENST00000459370 104 ntBASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 AC099521.1-201ENST00000482557 334 ntBASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 AC139365.2-201ENST00000517972 253 ntBASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 AP000648.1-201ENST00000529682 397 ntBASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 DPPA3P2-202ENST00000557188 1219 ntBASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 AL163952.1-202ENST00000569625 600 ntBASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 AL513327.3-201ENST00000602618 469 ntBASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 AC067773.1-201ENST00000603284 1094 ntBASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 AL031601.1-201ENST00000605702 394 ntBASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 AL359742.1-201ENST00000622497 540 ntBASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
PTPN20Q4JDL3 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 OR7E25P-201ENST00000344844 931 ntBASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 LYPLA1P3-201ENST00000402650 695 ntBASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 CDY8P-201ENST00000428380 1279 ntBASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 LDHAP2-201ENST00000437325 985 ntBASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 CDY20P-201ENST00000447528 1279 ntBASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 PFN1P8-201ENST00000497012 543 ntBASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 AC060780.2-201ENST00000589047 198 ntBASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 AC129915.3-201ENST00000634128 948 ntBASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTPN20Q4JDL3 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTPN20Q4JDL3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PTPN20Q4JDL3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
PTPN20Q4JDL3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTPN20Q4JDL3 OFD1P17-201ENST00000437639 3018 ntBASIC6.09□□□□□ -1.43
PTPN20Q4JDL3 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms