Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RN7SKP166-201ENST00000410812 305 ntBASIC6.78□□□□□ -1.32
CCNA1P78396 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.78□□□□□ -1.32
CCNA1P78396 HMGB3P24-201ENST00000433260 622 ntBASIC6.78□□□□□ -1.32
CCNA1P78396 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCNA1P78396 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.78□□□□□ -1.32
CCNA1P78396 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.78□□□□□ -1.32
CCNA1P78396 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.78□□□□□ -1.32
CCNA1P78396 AP005639.1-201ENST00000526939 192 ntBASIC6.78□□□□□ -1.32
CCNA1P78396 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.78□□□□□ -1.32
CCNA1P78396 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.78□□□□□ -1.32
CCNA1P78396 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.78□□□□□ -1.32
CCNA1P78396 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.78□□□□□ -1.32
CCNA1P78396 AC005899.7-201ENST00000618199 588 ntBASIC6.78□□□□□ -1.32
CCNA1P78396 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.78□□□□□ -1.32
CCNA1P78396 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
CCNA1P78396 AC092724.1-201ENST00000624623 3397 ntBASIC6.78□□□□□ -1.32
CCNA1P78396 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.78□□□□□ -1.32
CCNA1P78396 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCNA1P78396 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.78□□□□□ -1.32
CCNA1P78396 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
CCNA1P78396 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
CCNA1P78396 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
CCNA1P78396 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.77□□□□□ -1.32
CCNA1P78396 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.77□□□□□ -1.32
CCNA1P78396 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CCNA1P78396 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.77□□□□□ -1.33
CCNA1P78396 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCNA1P78396 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCNA1P78396 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.77□□□□□ -1.33
CCNA1P78396 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.77□□□□□ -1.33
CCNA1P78396 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.77□□□□□ -1.33
CCNA1P78396 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.77□□□□□ -1.33
CCNA1P78396 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.77□□□□□ -1.33
CCNA1P78396 AL137141.1-201ENST00000624622 4836 ntBASIC6.77□□□□□ -1.33
CCNA1P78396 RN7SKP124-201ENST00000364730 341 ntBASIC6.77□□□□□ -1.33
CCNA1P78396 RN7SKP29-201ENST00000410957 272 ntBASIC6.77□□□□□ -1.33
CCNA1P78396 AP000534.2-201ENST00000412729 568 ntBASIC6.77□□□□□ -1.33
CCNA1P78396 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.77□□□□□ -1.33
CCNA1P78396 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.77□□□□□ -1.33
CCNA1P78396 DEFA9P-201ENST00000433042 285 ntBASIC6.77□□□□□ -1.33
CCNA1P78396 FABP5P2-201ENST00000439042 408 ntBASIC6.77□□□□□ -1.33
CCNA1P78396 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.77□□□□□ -1.33
CCNA1P78396 AC093166.4-201ENST00000457867 318 ntBASIC6.77□□□□□ -1.33
CCNA1P78396 RPS23P6-201ENST00000466136 431 ntBASIC6.77□□□□□ -1.33
CCNA1P78396 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.77□□□□□ -1.33
CCNA1P78396 TPM3P3-201ENST00000521343 354 ntBASIC6.77□□□□□ -1.33
CCNA1P78396 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.77□□□□□ -1.33
CCNA1P78396 HMGB1P42-201ENST00000532126 553 ntBASIC6.77□□□□□ -1.33
CCNA1P78396 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.77□□□□□ -1.33
CCNA1P78396 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.77□□□□□ -1.33
CCNA1P78396 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCNA1P78396 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.77□□□□□ -1.33
CCNA1P78396 AL021707.7-201ENST00000607991 416 ntBASIC6.77□□□□□ -1.33
CCNA1P78396 AC008115.3-201ENST00000614874 549 ntBASIC6.77□□□□□ -1.33
CCNA1P78396 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.77□□□□□ -1.33
CCNA1P78396 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.77□□□□□ -1.33
CCNA1P78396 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.77□□□□□ -1.33
CCNA1P78396 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCNA1P78396 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCNA1P78396 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
CCNA1P78396 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.77□□□□□ -1.33
CCNA1P78396 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCNA1P78396 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CCNA1P78396 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCNA1P78396 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCNA1P78396 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCNA1P78396 AC016583.1-201ENST00000624221 2431 ntBASIC6.77□□□□□ -1.33
CCNA1P78396 OR4G1P-202ENST00000641173 1788 ntBASIC6.77□□□□□ -1.33
CCNA1P78396 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.77□□□□□ -1.33
CCNA1P78396 OFD1P17-201ENST00000437639 3018 ntBASIC6.76□□□□□ -1.33
CCNA1P78396 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.76□□□□□ -1.33
CCNA1P78396 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCNA1P78396 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCNA1P78396 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCNA1P78396 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.76□□□□□ -1.33
CCNA1P78396 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCNA1P78396 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCNA1P78396 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCNA1P78396 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.76□□□□□ -1.33
CCNA1P78396 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCNA1P78396 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.76□□□□□ -1.33
CCNA1P78396 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCNA1P78396 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCNA1P78396 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCNA1P78396 AC105749.1-201ENST00000631338 2008 ntBASIC6.76□□□□□ -1.33
CCNA1P78396 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.76□□□□□ -1.33
CCNA1P78396 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCNA1P78396 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCNA1P78396 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.76□□□□□ -1.33
CCNA1P78396 AL596448.1-201ENST00000415024 392 ntBASIC6.76□□□□□ -1.33
CCNA1P78396 PTCD2P2-201ENST00000415579 1095 ntBASIC6.76□□□□□ -1.33
CCNA1P78396 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.76□□□□□ -1.33
CCNA1P78396 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.76□□□□□ -1.33
CCNA1P78396 AC103563.5-201ENST00000455643 364 ntBASIC6.76□□□□□ -1.33
CCNA1P78396 AC112187.1-201ENST00000455837 479 ntBASIC6.76□□□□□ -1.33
CCNA1P78396 CCDC11P1-201ENST00000503137 1162 ntBASIC6.76□□□□□ -1.33
CCNA1P78396 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.76□□□□□ -1.33
CCNA1P78396 AC073581.1-201ENST00000519036 575 ntBASIC6.76□□□□□ -1.33
CCNA1P78396 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.76□□□□□ -1.33
CCNA1P78396 AP004607.6-201ENST00000525033 1202 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms