Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH11P55287 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH11P55287 AL137141.1-201ENST00000624622 4836 ntBASIC5.55□□□□□ -1.52
CDH11P55287 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CDH11P55287 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH11P55287 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH11P55287 RNF19BPY-201ENST00000458209 1550 ntBASIC5.55□□□□□ -1.52
CDH11P55287 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH11P55287 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.54□□□□□ -1.52
CDH11P55287 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH11P55287 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
CDH11P55287 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH11P55287 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH11P55287 AL161912.4-201ENST00000623889 2468 ntBASIC5.54□□□□□ -1.52
CDH11P55287 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH11P55287 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH11P55287 AC123769.1-201ENST00000530992 3192 ntBASIC5.54□□□□□ -1.52
CDH11P55287 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH11P55287 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH11P55287 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CDH11P55287 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
CDH11P55287 RNA5SP433-201ENST00000364491 114 ntBASIC5.54□□□□□ -1.52
CDH11P55287 RNU11-201ENST00000387069 134 ntBASIC5.54□□□□□ -1.52
CDH11P55287 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.54□□□□□ -1.52
CDH11P55287 MIR1282-201ENST00000408865 101 ntBASIC5.54□□□□□ -1.52
CDH11P55287 DHFRP2-201ENST00000414224 547 ntBASIC5.54□□□□□ -1.52
CDH11P55287 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH11P55287 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.54□□□□□ -1.52
CDH11P55287 RANP7-201ENST00000418085 644 ntBASIC5.54□□□□□ -1.52
CDH11P55287 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH11P55287 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.54□□□□□ -1.52
CDH11P55287 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH11P55287 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH11P55287 USP24P1-201ENST00000433802 779 ntBASIC5.54□□□□□ -1.52
CDH11P55287 AL356390.1-201ENST00000455684 397 ntBASIC5.54□□□□□ -1.52
CDH11P55287 AC093719.1-201ENST00000480427 441 ntBASIC5.54□□□□□ -1.52
CDH11P55287 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH11P55287 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH11P55287 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH11P55287 HMGN1P17-201ENST00000513734 295 ntBASIC5.54□□□□□ -1.52
CDH11P55287 ZNF519P4-201ENST00000514008 125 ntBASIC5.54□□□□□ -1.52
CDH11P55287 HSD3BP3-201ENST00000514706 994 ntBASIC5.54□□□□□ -1.52
CDH11P55287 AP002981.1-201ENST00000517692 975 ntBASIC5.54□□□□□ -1.52
CDH11P55287 AP003168.1-201ENST00000530091 307 ntBASIC5.54□□□□□ -1.52
CDH11P55287 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH11P55287 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.54□□□□□ -1.52
CDH11P55287 AC002519.2-203ENST00000567043 837 ntBASIC5.54□□□□□ -1.52
CDH11P55287 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH11P55287 RN7SL475P-201ENST00000583379 298 ntBASIC5.54□□□□□ -1.52
CDH11P55287 AL360012.1-201ENST00000602813 131 ntBASIC5.54□□□□□ -1.52
CDH11P55287 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.54□□□□□ -1.52
CDH11P55287 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH11P55287 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH11P55287 AL137067.2-201ENST00000621202 131 ntBASIC5.54□□□□□ -1.52
CDH11P55287 AP003400.6-201ENST00000624698 740 ntBASIC5.54□□□□□ -1.52
CDH11P55287 AC000095.2-202ENST00000637415 154 ntBASIC5.54□□□□□ -1.52
CDH11P55287 AP000550.3-201ENST00000637734 379 ntBASIC5.54□□□□□ -1.52
CDH11P55287 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.54□□□□□ -1.52
CDH11P55287 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
CDH11P55287 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
CDH11P55287 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH11P55287 IFIT1P1-201ENST00000400497 1449 ntBASIC5.54□□□□□ -1.52
CDH11P55287 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDH11P55287 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH11P55287 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CDH11P55287 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH11P55287 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH11P55287 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH11P55287 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH11P55287 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH11P55287 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH11P55287 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH11P55287 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH11P55287 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH11P55287 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH11P55287 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH11P55287 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH11P55287 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH11P55287 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH11P55287 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH11P55287 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH11P55287 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH11P55287 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH11P55287 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH11P55287 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CDH11P55287 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH11P55287 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH11P55287 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CDH11P55287 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH11P55287 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH11P55287 AL136116.2-201ENST00000404020 785 ntBASIC5.53□□□□□ -1.52
CDH11P55287 GCNT1P4-201ENST00000404096 329 ntBASIC5.53□□□□□ -1.52
CDH11P55287 USP9YP19-201ENST00000412165 485 ntBASIC5.53□□□□□ -1.52
CDH11P55287 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH11P55287 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH11P55287 KCTD9P1-201ENST00000430462 1167 ntBASIC5.53□□□□□ -1.52
CDH11P55287 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH11P55287 TRIM60P13-201ENST00000432350 1283 ntBASIC5.53□□□□□ -1.52
CDH11P55287 AC007679.3-201ENST00000434035 414 ntBASIC5.53□□□□□ -1.52
CDH11P55287 AC073410.1-201ENST00000435125 589 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms